Orthologous regulated operons containing cydD gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -137
Score: 4.17848 Sequence: TTTTTTGATCCAGCGCAAATTC
Position: -118
Score: 4.15489 Sequence: TTCTGTGAATCCCCTAACAAAT
Locus tag: Sama_2679
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Sama_2678
Name: cydC Funciton: Transport ATP-binding protein CydC |
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| cydD-cydC | -137 | 4.2 | TTTTTTGATCCAGCGCAAATTC | Sama_2679 |
| -118 | 4.2 | TTCTGTGAATCCCCTAACAAAT | ||
| Shewanella baltica OS155 | ||||
|
Position: -170
Score: 4.32667 Sequence: TTTTGTGAGTCTGCTAGCAAAA
Locus tag: Sbal_3463
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Sbal_3462
Name: cydC Funciton: Transport ATP-binding protein CydC
Locus tag: Sbal_3461
Name: cyaB Funciton: adenylate cyclase CyaB, putative |
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| cydD-cydC-cyaB | -170 | 4.3 | TTTTGTGAGTCTGCTAGCAAAA | Sbal_3463 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -214
Score: 4.22584 Sequence: TATTGTGTTGCAATTAACAATG
Position: -104
Score: 4.96667 Sequence: AAATGTGAATCAGATAACATTT
Locus tag: Sfri_3213
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Sfri_3212
Name: cydC Funciton: Transport ATP-binding protein CydC |
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| cydD-cydC | -214 | 4.2 | TATTGTGTTGCAATTAACAATG | Sfri_3213 |
| -104 | 5 | AAATGTGAATCAGATAACATTT | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -233
Score: 4.07345 Sequence: TTTATTGATCTAGCTCAATTTT
Position: -214
Score: 4.8735 Sequence: TTTTGTGAGTCCGATAACATTT
Locus tag: Shal_3589
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Shal_3588
Name: cydC Funciton: Transport ATP-binding protein CydC |
||||
| cydD-cydC | -233 | 4.1 | TTTATTGATCTAGCTCAATTTT | Shal_3589 |
| -214 | 4.9 | TTTTGTGAGTCCGATAACATTT | ||
| Shewanella loihica PV-4 | ||||
|
Position: -129
Score: 4.51623 Sequence: TTTTTTGATCTAGCTCAATTTT
Position: -110
Score: 4.79714 Sequence: TTTTGTGAGCCTAATAACAATT
Locus tag: Shew_0613
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Shew_0614
Name: cydC Funciton: Transport ATP-binding protein CydC |
||||
| cydD-cydC | -129 | 4.5 | TTTTTTGATCTAGCTCAATTTT | Shew_0613 |
| -110 | 4.8 | TTTTGTGAGCCTAATAACAATT | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -191
Score: 4.36443 Sequence: TTTATTGATCAGCATCGCATTT
Locus tag: SO3780
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: SO3779
Name: cydC Funciton: Transport ATP-binding protein CydC
Locus tag: SO3778
Name: cyaB Funciton: adenylate cyclase CyaB, putative |
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| cydD-cydC-cyaB | -191 | 4.4 | TTTATTGATCAGCATCGCATTT | SO3780 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -185
Score: 4.07345 Sequence: TTTATTGATCTAGCTCAATTTT
Position: -166
Score: 4.44164 Sequence: TTTTGTGAGTCCGATAGCAAAT
Locus tag: Spea_3494
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Spea_3493
Name: cydC Funciton: Transport ATP-binding protein CydC |
||||
| cydD-cydC | -185 | 4.1 | TTTATTGATCTAGCTCAATTTT | Spea_3494 |
| -166 | 4.4 | TTTTGTGAGTCCGATAGCAAAT | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -169
Score: 4.74203 Sequence: TTTTGTGAATCGGTTAACAAAA
Locus tag: Sputcn32_3106
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Sputcn32_3105
Name: cydC Funciton: Transport ATP-binding protein CydC
Locus tag: Sputcn32_3104
Name: cyaB Funciton: adenylate cyclase CyaB, putative |
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| cydD-cydC-cyaB | -169 | 4.7 | TTTTGTGAATCGGTTAACAAAA | Sputcn32_3106 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -139
Score: 4.09363 Sequence: AAAATTGATCTAGCTCAATTTT
Position: -120
Score: 4.68176 Sequence: TTTTGTGAATCCGTTAACAATT
Locus tag: Ssed_3849
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Ssed_3848
Name: cydC Funciton: Transport ATP-binding protein CydC |
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| cydD-cydC | -139 | 4.1 | AAAATTGATCTAGCTCAATTTT | Ssed_3849 |
| -120 | 4.7 | TTTTGTGAATCCGTTAACAATT | ||
| Shewanella sp ANA-3 | ||||
|
Position: -187
Score: 4.44609 Sequence: TTTATTGATCTTTATCTCATTT
Position: -167
Score: 4.54454 Sequence: TTTTGTGAATAGGCTAACAAAA
Locus tag: Shewana3_0812
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Shewana3_0813
Name: cydC Funciton: Transport ATP-binding protein CydC
Locus tag: Shewana3_0814
Name: cyaB Funciton: adenylate cyclase CyaB, putative |
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| cydD-cydC-cyaB | -187 | 4.4 | TTTATTGATCTTTATCTCATTT | Shewana3_0812 |
| -167 | 4.5 | TTTTGTGAATAGGCTAACAAAA | ||
| Shewanella sp MR-4 | ||||
|
Position: -187
Score: 4.44609 Sequence: TTTATTGATCTTTATCTCATTT
Position: -167
Score: 4.54454 Sequence: TTTTGTGAATAGGCTAACAAAA
Locus tag: Shewmr4_3127
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Shewmr4_3126
Name: cydC Funciton: Transport ATP-binding protein CydC
Locus tag: Shewmr4_3125
Name: cyaB Funciton: adenylate cyclase CyaB, putative |
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| cydD-cydC-cyaB | -187 | 4.4 | TTTATTGATCTTTATCTCATTT | Shewmr4_3127 |
| -167 | 4.5 | TTTTGTGAATAGGCTAACAAAA | ||
| Shewanella sp MR-7 | ||||
|
Position: -187
Score: 4.44609 Sequence: TTTATTGATCTTTATCTCATTT
Position: -167
Score: 4.54454 Sequence: TTTTGTGAATAGGCTAACAAAA
Locus tag: Shewmr7_0840
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Shewmr7_0841
Name: cydC Funciton: Transport ATP-binding protein CydC
Locus tag: Shewmr7_0842
Name: cyaB Funciton: adenylate cyclase CyaB, putative |
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| cydD-cydC-cyaB | -187 | 4.4 | TTTATTGATCTTTATCTCATTT | Shewmr7_0840 |
| -167 | 4.5 | TTTTGTGAATAGGCTAACAAAA | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -169
Score: 4.74203 Sequence: TTTTGTGAATCGGTTAACAAAA
Locus tag: Sputw3181_0838
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Sputw3181_0839
Name: cydC Funciton: Transport ATP-binding protein CydC
Locus tag: Sputw3181_0840
Name: cyaB Funciton: adenylate cyclase CyaB, putative |
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| cydD-cydC-cyaB | -169 | 4.7 | TTTTGTGAATCGGTTAACAAAA | Sputw3181_0838 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -149
Score: 4.07345 Sequence: TTTATTGATCTAGCTCAATTTT
Position: -130
Score: 4.69465 Sequence: TTTTGTGAATCTCTTAACATTT
Locus tag: Swoo_0710
Name: cydD Funciton: Transport ATP-binding protein CydD
Locus tag: Swoo_0711
Name: cydC Funciton: Transport ATP-binding protein CydC |
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| cydD-cydC | -149 | 4.1 | TTTATTGATCTAGCTCAATTTT | Swoo_0710 |
| -130 | 4.7 | TTTTGTGAATCTCTTAACATTT | ||