Orthologous regulated operons containing ccmD gene

Properties
Regulog:	NarP - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	activator (repressor)
Biological process:	Nitrate and nitrite respiration
Effector:	Nitrate; Nitrite
Phylum:	Proteobacteria/gamma

Built upon 125 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Edwardsiella tarda EIB202
Position: -64 Score: 4.36962 Sequence: TACCCCGAATGAGTTA Locus tag: ETAE_2461 Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Locus tag: ETAE_2460 Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit Locus tag: ETAE_2459 Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Locus tag: ETAE_2458 Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Locus tag: ETAE_2457 Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone Locus tag: ETAE_2456 Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF Locus tag: ETAE_2455 Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Locus tag: ETAE_2454 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH Locus tag: ETAE_2453 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH	-64	4.4	TACCCCGAATGAGTTA	ETAE_2461
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -86 Score: 4.62542 Sequence: TAACCCTTTAGGGTTA Locus tag: ECA1882 Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Locus tag: ECA1883 Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit Locus tag: ECA1884 Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Locus tag: ECA1885 Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Locus tag: ECA1886 Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone Locus tag: ECA1887 Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF Locus tag: ECA1888 Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Locus tag: ECA1889 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH Locus tag: ECA1890 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH	-86	4.6	TAACCCTTTAGGGTTA	ECA1882
Escherichia coli str. K-12 substr. MG1655
Position: -129 Score: 4.64962 Sequence: TACCCCGATCGGGGTA Locus tag: b2208 Name: napF Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF Locus tag: b2207 Name: napD Funciton: Periplasmic nitrate reductase component NapD Locus tag: b2206 Name: napA Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4) Locus tag: b2205 Name: napG Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG Locus tag: b2204 Name: napH Funciton: Periplasmic nitrate reductase, polyferredoxin NapH Locus tag: b2203 Name: napB Funciton: Nitrate reductase cytochrome c550-type subunit Locus tag: b2202 Name: napC Funciton: Cytochrome c-type protein NapC Locus tag: b2201 Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Locus tag: b2200 Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit Locus tag: b2199 Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Locus tag: b2198 Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Locus tag: b2197 Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone Locus tag: b2196 Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF Locus tag: b2195 Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Locus tag: b2194 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
napF-napD-napA-napG-napH-napB-napC-ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH	-129	4.6	TACCCCGATCGGGGTA	b2208
Salmonella typhimurium LT2
Position: -132 Score: 4.78922 Sequence: TACCTCTATCGGGGTA Locus tag: STM2261 Name: napF Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF Locus tag: STM2260 Name: napD Funciton: Periplasmic nitrate reductase component NapD Locus tag: STM2259 Name: napA Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4) Locus tag: STM2258 Name: napG Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG Locus tag: STM2257 Name: napH Funciton: Periplasmic nitrate reductase, polyferredoxin NapH Locus tag: STM2256 Name: napB Funciton: Nitrate reductase cytochrome c550-type subunit Locus tag: STM2255 Name: napC Funciton: Cytochrome c-type protein NapC Locus tag: STM2254 Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Locus tag: STM2253 Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit Locus tag: STM2252 Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Locus tag: STM2251 Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Locus tag: STM2250 Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone Locus tag: STM2249 Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF Locus tag: STM2248 Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Locus tag: STM2247 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
napF-napD-napA-napG-napH-napB-napC-ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH	-132	4.8	TACCTCTATCGGGGTA	STM2261
Serratia proteamaculans 568
Position: -49 Score: 4.86997 Sequence: TACCCCTATTGGAGTA Locus tag: Spro_3391 Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Locus tag: Spro_3390 Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit Locus tag: Spro_3389 Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Locus tag: Spro_3388 Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Locus tag: Spro_3387 Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone Locus tag: Spro_3386 Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF Locus tag: Spro_3385 Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Locus tag: Spro_3384 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH Locus tag: Spro_3383 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH	-49	4.9	TACCCCTATTGGAGTA	Spro_3391
Yersinia pestis KIM
Position: -112 Score: 4.75559 Sequence: TACCTCTATAAGGGTA Locus tag: y1567 Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Locus tag: y1568 Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit Locus tag: y1569 Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Locus tag: y1570 Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Locus tag: y1571 Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone Locus tag: y1572 Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF Locus tag: y1573 Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Locus tag: y1574 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH Locus tag: y1575 Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH	-112	4.8	TACCTCTATAAGGGTA	y1567