Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nirB gene

Properties
Regulog: NarP - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrate; Nitrite
Phylum: Proteobacteria/gamma
Built upon 125 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -101
Score: 5.16615
Sequence: TACCTCTTAAGGAGTA
Locus tag: CKO_04789
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: CKO_04790
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: CKO_04791
Name: nirC
Funciton: Nitrite transporter, FNT family
Locus tag: CKO_04792
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB-nirD-nirC-cysG -101 5.2 TACCTCTTAAGGAGTA CKO_04789
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -100
Score: 4.75868
Sequence: TACCCACAAAGAAGTA
Locus tag: ECA4079
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: ECA4080
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: ECA4081
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB-nirD-cysG -100 4.8 TACCCACAAAGAAGTA ECA4079
Escherichia coli str. K-12 substr. MG1655
Position: -101
Score: 5.08839
Sequence: TACCCATTAAGGAGTA
Locus tag: b3365
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: b3366
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: b3367
Name: nirC
Funciton: Nitrite transporter, FNT family
Locus tag: b3368
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB-nirD-nirC-cysG -101 5.1 TACCCATTAAGGAGTA b3365
Proteus mirabilis HI4320
Position: -134
Score: 4.08099
Sequence: TACTACTTTGGTAGTA
Locus tag: PMI1479
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: PMI1478
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: PMI1477
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB-nirD-cysG -134 4.1 TACTACTTTGGTAGTA PMI1479
Salmonella typhimurium LT2
Position: -101
Score: 5.0429
Sequence: TACCCATTAAGAGGTA
Locus tag: STM3474
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: STM3475
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: STM3476
Name: nirC
Funciton: Nitrite transporter, FNT family
Locus tag: STM3477
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB-nirD-nirC-cysG -101 5 TACCCATTAAGAGGTA STM3474
Serratia proteamaculans 568
Position: -197
Score: 4.53059
Sequence: TACTCCCGAATGGGTA
Position: -101
Score: 4.48479
Sequence: TACCACATTAGAGGTA
Locus tag: Spro_4595
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: Spro_4596
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: Spro_4597
Name: nirC
Funciton: Nitrite transporter, FNT family
Locus tag: Spro_4598
Name: cysG
Funciton: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nirB-nirD-nirC-cysG -197 4.5 TACTCCCGAATGGGTA Spro_4595
-101 4.5 TACCACATTAGAGGTA
Yersinia pestis KIM
Position: -100
Score: 4.54999
Sequence: TACCACCTTAGAGGTA
Locus tag: y3945
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: y3944
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
nirB-nirD -100 4.5 TACCACCTTAGAGGTA y3945
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