Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cysD gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella frigidimarina NCIMB 400
Position: -37
Score: 4.16543
Sequence: ATATTTGAACATGGTCAAATAT
Position: -7
Score: 4.06289
Sequence: AAATGTGATGGAGTTAGTATCT
Locus tag: Sfri_3188
Name: cobA
Funciton: uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Sfri_3187
Name: cysD
Funciton: sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: Sfri_3186
Name: cysN
Funciton: sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Locus tag: Sfri_3185
Name: Shew_1424
Funciton: sulfate permease, Trk-type
Locus tag: Sfri_3184
Name: cysC
Funciton: adenylylsulfate kinase (EC 2.7.1.25)
cobA-cysD-cysN-Shew_1424-cysC -37 4.2 ATATTTGAACATGGTCAAATAT Sfri_3188
-7 4.1 AAATGTGATGGAGTTAGTATCT
Shewanella pealeana ATCC 700345
Position: -148
Score: 4.08186
Sequence: CAATGTGTTGCATGGCACATAA
Locus tag: Spea_0662
Name: cobA
Funciton: uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Spea_0663
Name: cysD
Funciton: sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: Spea_0664
Name: cysN
Funciton: sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Locus tag: Spea_0665
Name: Shew_1424
Funciton: sulfate permease, Trk-type
Locus tag: Spea_0666
Name: cysC
Funciton: adenylylsulfate kinase (EC 2.7.1.25)
cobA-cysD-cysN-Shew_1424-cysC -148 4.1 CAATGTGTTGCATGGCACATAA Spea_0662
Shewanella piezotolerans WP3
Position: -119
Score: 4.33826
Sequence: TTTTATGATATGCATCACCTCA
Locus tag: swp_4059
Name: cobA
Funciton: uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: swp_4058
Name: cysD
Funciton: sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: swp_4057
Name: cysN
Funciton: sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Locus tag: swp_4056
Name: Shew_1424
Funciton: sulfate permease, Trk-type
Locus tag: swp_4055
Name: cysC
Funciton: adenylylsulfate kinase (EC 2.7.1.25)
cobA-cysD-cysN-Shew_1424-cysC -119 4.3 TTTTATGATATGCATCACCTCA swp_4059
Shewanella sp ANA-3
Position: -248
Score: 4.24385
Sequence: TTATGTGAGCTGATGCAAGTTT
Locus tag: Shewana3_0862
Name: cobA
Funciton: uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Shewana3_0863
Name: cysD
Funciton: sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: Shewana3_0864
Name: cysN
Funciton: sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Locus tag: Shewana3_0865
Name: Shew_1424
Funciton: sulfate permease, Trk-type
Locus tag: Shewana3_0866
Name: cysC
Funciton: adenylylsulfate kinase (EC 2.7.1.25)
cobA-cysD-cysN-Shew_1424-cysC -248 4.2 TTATGTGAGCTGATGCAAGTTT Shewana3_0862
Shewanella sp MR-4
Position: -248
Score: 4.16821
Sequence: TTATGTGAGGTGACGCAAGTTT
Locus tag: Shewmr4_3073
Name: cobA
Funciton: uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Shewmr4_3072
Name: cysD
Funciton: sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: Shewmr4_3071
Name: cysN
Funciton: sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Locus tag: Shewmr4_3070
Name: Shew_1424
Funciton: sulfate permease, Trk-type
Locus tag: Shewmr4_3069
Name: cysC
Funciton: adenylylsulfate kinase (EC 2.7.1.25)
cobA-cysD-cysN-Shew_1424-cysC -248 4.2 TTATGTGAGGTGACGCAAGTTT Shewmr4_3073
Shewanella sp MR-7
Position: -248
Score: 4.24385
Sequence: TTATGTGAGCTGATGCAAGTTT
Locus tag: Shewmr7_0899
Name: cobA
Funciton: uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Shewmr7_0900
Name: cysD
Funciton: sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: Shewmr7_0901
Name: cysN
Funciton: sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Locus tag: Shewmr7_0902
Name: Shew_1424
Funciton: sulfate permease, Trk-type
Locus tag: Shewmr7_0903
Name: cysC
Funciton: adenylylsulfate kinase (EC 2.7.1.25)
cobA-cysD-cysN-Shew_1424-cysC -248 4.2 TTATGTGAGCTGATGCAAGTTT Shewmr7_0899
Shewanella woodyi ATCC 51908
Position: -66
Score: 4.21089
Sequence: TAAAGTGATGAATCTTAAATTT
Locus tag: Swoo_1686
Name: cysD
Funciton: sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: Swoo_1687
Name: cysN
Funciton: sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Locus tag: Swoo_1688
Name: Shew_1424
Funciton: sulfate permease, Trk-type
Locus tag: Swoo_1689
Name: cysC
Funciton: adenylylsulfate kinase (EC 2.7.1.25)
cysD-cysN-Shew_1424-cysC -66 4.2 TAAAGTGATGAATCTTAAATTT Swoo_1686
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