Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sdhB gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -80
Score: 3.67117
Sequence: TTTTGTGACGACTGTCGCCGTG
Locus tag: Sama_1423
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sama_1424
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sama_1425
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sama_1426
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sama_1427
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sama_1428
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sama_1429
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sama_1430
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -80 3.7 TTTTGTGACGACTGTCGCCGTG Sama_1423
Shewanella baltica OS155
Position: -66
Score: 3.78702
Sequence: TGCCGTGATTCACATCCCAGTT
Locus tag: Sbal_2519
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sbal_2518
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sbal_2517
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sbal_2516
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sbal_2515
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sbal_2514
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sbal_2513
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sbal_2512
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -66 3.8 TGCCGTGATTCACATCCCAGTT Sbal_2519
Shewanella denitrificans OS217
Position: -274
Score: 3.71915
Sequence: TGGATTGATGCAAATTACAAAA
Position: -186
Score: 3.83004
Sequence: AAGGGCGACAAACATCACAATT
Locus tag: Sden_2187
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sden_2186
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sden_2185
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sden_2184
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sden_2183
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sden_2182
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sden_2181
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sden_2180
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -274 3.7 TGGATTGATGCAAATTACAAAA Sden_2187
-186 3.8 AAGGGCGACAAACATCACAATT
Shewanella frigidimarina NCIMB 400
Position: -74
Score: 4.07765
Sequence: ACGTGTGATGTAACTTACGTTA
Position: -19
Score: 3.6868
Sequence: AAGTTTGAAAGGAATAACAATG
Locus tag: Sfri_2347
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sfri_2346
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sfri_2345
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sfri_2344
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sfri_2343
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sfri_2342
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sfri_2341
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sfri_2340
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -74 4.1 ACGTGTGATGTAACTTACGTTA Sfri_2347
-19 3.7 AAGTTTGAAAGGAATAACAATG
Shewanella halifaxensis HAW-EB4
Position: -86
Score: 4.86045
Sequence: ATCTGTGATCTGGATCACCGAT
Locus tag: Shal_2493
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Shal_2492
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Shal_2491
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Shal_2490
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Shal_2489
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Shal_2488
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Shal_2487
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Shal_2486
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -86 4.9 ATCTGTGATCTGGATCACCGAT Shal_2493
Shewanella pealeana ATCC 700345
Position: -86
Score: 4.38802
Sequence: AACCGTGATCTGGATCACTGAT
Locus tag: Spea_1784
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Spea_1785
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Spea_1786
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Spea_1787
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Spea_1788
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Spea_1789
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Spea_1790
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Spea_1791
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -86 4.4 AACCGTGATCTGGATCACTGAT Spea_1784
Shewanella piezotolerans WP3
Position: -20
Score: 4.63605
Sequence: AACTGTGACCTAGTTCACGGAT
Locus tag: swp_2955
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: swp_2953
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: swp_2952
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: swp_2950
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: swp_2949
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: swp_2948
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: swp_2947
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: swp_2946
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -20 4.6 AACTGTGACCTAGTTCACGGAT swp_2955
Shewanella putrefaciens CN-32
Position: -66
Score: 3.78713
Sequence: TGCCGTGATTTATCTCCCAGTT
Locus tag: Sputcn32_2273
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sputcn32_2272
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sputcn32_2271
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sputcn32_2270
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sputcn32_2269
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sputcn32_2268
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sputcn32_2267
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sputcn32_2266
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -66 3.8 TGCCGTGATTTATCTCCCAGTT Sputcn32_2273
Shewanella sediminis HAW-EB3
Position: -86
Score: 4.19352
Sequence: GATCGTGACCTGTGTCACAGTT
Locus tag: Ssed_2818
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Ssed_2817
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Ssed_2816
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Ssed_2815
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Ssed_2814
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Ssed_2813
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Ssed_2812
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Ssed_2811
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -86 4.2 GATCGTGACCTGTGTCACAGTT Ssed_2818
Shewanella sp W3-18-1
Position: -66
Score: 3.78713
Sequence: TGCCGTGATTTATCTCCCAGTT
Locus tag: Sputw3181_1735
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sputw3181_1736
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sputw3181_1737
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sputw3181_1738
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sputw3181_1739
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sputw3181_1740
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sputw3181_1741
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sputw3181_1742
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -66 3.8 TGCCGTGATTTATCTCCCAGTT Sputw3181_1735
Shewanella woodyi ATCC 51908
Position: -87
Score: 4.81834
Sequence: ATTTGTGATCTAAATCACGCCT
Locus tag: Swoo_1833
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Swoo_1834
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Swoo_1835
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Swoo_1836
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Swoo_1837
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Swoo_1838
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Swoo_1839
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Swoo_1840
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD -87 4.8 ATTTGTGATCTAAATCACGCCT Swoo_1833
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