Orthologous regulated operons containing sdhC gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -80
Score: 3.67117 Sequence: TTTTGTGACGACTGTCGCCGTG
Locus tag: Sama_1423
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sama_1424
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sama_1425
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sama_1426
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sama_1427
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sama_1428
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sama_1429
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sama_1430
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -80 | 3.7 | TTTTGTGACGACTGTCGCCGTG | Sama_1423 |
| Shewanella baltica OS155 | ||||
|
Position: -66
Score: 3.78702 Sequence: TGCCGTGATTCACATCCCAGTT
Locus tag: Sbal_2519
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sbal_2518
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sbal_2517
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sbal_2516
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sbal_2515
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sbal_2514
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sbal_2513
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sbal_2512
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -66 | 3.8 | TGCCGTGATTCACATCCCAGTT | Sbal_2519 |
| Shewanella denitrificans OS217 | ||||
|
Position: -274
Score: 3.71915 Sequence: TGGATTGATGCAAATTACAAAA
Position: -186
Score: 3.83004 Sequence: AAGGGCGACAAACATCACAATT
Locus tag: Sden_2187
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sden_2186
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sden_2185
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sden_2184
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sden_2183
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sden_2182
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sden_2181
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sden_2180
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -274 | 3.7 | TGGATTGATGCAAATTACAAAA | Sden_2187 |
| -186 | 3.8 | AAGGGCGACAAACATCACAATT | ||
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -74
Score: 4.07765 Sequence: ACGTGTGATGTAACTTACGTTA
Position: -19
Score: 3.6868 Sequence: AAGTTTGAAAGGAATAACAATG
Locus tag: Sfri_2347
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sfri_2346
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sfri_2345
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sfri_2344
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sfri_2343
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sfri_2342
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sfri_2341
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sfri_2340
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -74 | 4.1 | ACGTGTGATGTAACTTACGTTA | Sfri_2347 |
| -19 | 3.7 | AAGTTTGAAAGGAATAACAATG | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -86
Score: 4.86045 Sequence: ATCTGTGATCTGGATCACCGAT
Locus tag: Shal_2493
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Shal_2492
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Shal_2491
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Shal_2490
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Shal_2489
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Shal_2488
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Shal_2487
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Shal_2486
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
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| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -86 | 4.9 | ATCTGTGATCTGGATCACCGAT | Shal_2493 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -86
Score: 4.38802 Sequence: AACCGTGATCTGGATCACTGAT
Locus tag: Spea_1784
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Spea_1785
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Spea_1786
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Spea_1787
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Spea_1788
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Spea_1789
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Spea_1790
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Spea_1791
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -86 | 4.4 | AACCGTGATCTGGATCACTGAT | Spea_1784 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -20
Score: 4.63605 Sequence: AACTGTGACCTAGTTCACGGAT
Locus tag: swp_2955
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: swp_2953
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: swp_2952
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: swp_2950
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: swp_2949
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: swp_2948
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: swp_2947
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: swp_2946
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -20 | 4.6 | AACTGTGACCTAGTTCACGGAT | swp_2955 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -66
Score: 3.78713 Sequence: TGCCGTGATTTATCTCCCAGTT
Locus tag: Sputcn32_2273
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sputcn32_2272
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sputcn32_2271
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sputcn32_2270
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sputcn32_2269
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sputcn32_2268
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sputcn32_2267
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sputcn32_2266
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
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| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -66 | 3.8 | TGCCGTGATTTATCTCCCAGTT | Sputcn32_2273 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -86
Score: 4.19352 Sequence: GATCGTGACCTGTGTCACAGTT
Locus tag: Ssed_2818
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Ssed_2817
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Ssed_2816
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Ssed_2815
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Ssed_2814
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Ssed_2813
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Ssed_2812
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Ssed_2811
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
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| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -86 | 4.2 | GATCGTGACCTGTGTCACAGTT | Ssed_2818 |
| Shewanella sp W3-18-1 | ||||
|
Position: -66
Score: 3.78713 Sequence: TGCCGTGATTTATCTCCCAGTT
Locus tag: Sputw3181_1735
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sputw3181_1736
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sputw3181_1737
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sputw3181_1738
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sputw3181_1739
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sputw3181_1740
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sputw3181_1741
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sputw3181_1742
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
||||
| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -66 | 3.8 | TGCCGTGATTTATCTCCCAGTT | Sputw3181_1735 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -87
Score: 4.81834 Sequence: ATTTGTGATCTAAATCACGCCT
Locus tag: Swoo_1833
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Swoo_1834
Name: SO1927.1 Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Swoo_1835
Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Swoo_1836
Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Swoo_1837
Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Swoo_1838
Name: sucB Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Swoo_1839
Name: sucC Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Swoo_1840
Name: sucD Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) |
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| sdhC-SO1927.1-sdhA-sdhB-sucA-sucB-sucC-sucD | -87 | 4.8 | ATTTGTGATCTAAATCACGCCT | Swoo_1833 |