Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing mshI gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella denitrificans OS217
Position: -298
Score: 3.80615
Sequence: TCTTGTTATTTAAACAACATTT
Position: -197
Score: 4.1877
Sequence: TAATGTGATGCATAGCAGCCTT
Locus tag: Sden_3353
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sden_3352
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sden_3351
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -298 3.8 TCTTGTTATTTAAACAACATTT Sden_3353
-197 4.2 TAATGTGATGCATAGCAGCCTT
Shewanella frigidimarina NCIMB 400
Position: -303
Score: 4.06916
Sequence: TATTGTTATTTAGACAAAATAA
Locus tag: Sfri_3757
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sfri_3756
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sfri_3755
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -303 4.1 TATTGTTATTTAGACAAAATAA Sfri_3757
Shewanella halifaxensis HAW-EB4
Position: -196
Score: 3.76172
Sequence: TATAGCGATAAAGTTAAAAAAT
Locus tag: Shal_3859
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Shal_3858
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Shal_3857
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -196 3.8 TATAGCGATAAAGTTAAAAAAT Shal_3859
Shewanella oneidensis MR-1
Position: -318
Score: 4.35315
Sequence: TATTGTAATTTAGTCAACATTT
Position: -132
Score: 4.34144
Sequence: AAATGTGACCTAATTGACGTAT
Locus tag: SO4118
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: SO4116
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: SO4114.2
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -318 4.4 TATTGTAATTTAGTCAACATTT SO4118
-132 4.3 AAATGTGACCTAATTGACGTAT
Shewanella pealeana ATCC 700345
Position: -196
Score: 3.76172
Sequence: TATAGCGATAAAGTTAAAAAAT
Locus tag: Spea_3774
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Spea_3773
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Spea_3772
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -196 3.8 TATAGCGATAAAGTTAAAAAAT Spea_3774
Shewanella putrefaciens CN-32
Position: -313
Score: 3.95742
Sequence: TATTGTAATTTAGCCAAAATTT
Position: -114
Score: 3.80771
Sequence: GAATATGACAGGTTTCACGTTT
Locus tag: Sputcn32_0554
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sputcn32_0555
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sputcn32_0556
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -313 4 TATTGTAATTTAGCCAAAATTT Sputcn32_0554
-114 3.8 GAATATGACAGGTTTCACGTTT
Shewanella sp ANA-3
Position: -312
Score: 4.24117
Sequence: TATTGTAATTTAATCAACATTT
Position: -119
Score: 4.19839
Sequence: GGATATGATGGGTTTCACATTT
Locus tag: Shewana3_3669
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Shewana3_3668
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Shewana3_3667
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -312 4.2 TATTGTAATTTAATCAACATTT Shewana3_3669
-119 4.2 GGATATGATGGGTTTCACATTT
Shewanella sp MR-4
Position: -312
Score: 4.24117
Sequence: TATTGTAATTTAATCAACATTT
Locus tag: Shewmr4_3492
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Shewmr4_3491
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Shewmr4_3490
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -312 4.2 TATTGTAATTTAATCAACATTT Shewmr4_3492
Shewanella sp MR-7
Position: -312
Score: 4.24117
Sequence: TATTGTAATTTAATCAACATTT
Locus tag: Shewmr7_0460
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Shewmr7_0461
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Shewmr7_0462
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -312 4.2 TATTGTAATTTAATCAACATTT Shewmr7_0460
Shewanella sp W3-18-1
Position: -313
Score: 3.95742
Sequence: TATTGTAATTTAGCCAAAATTT
Position: -114
Score: 3.80771
Sequence: GAATATGACAGGTTTCACGTTT
Locus tag: Sputw3181_3618
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sputw3181_3617
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sputw3181_3616
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -313 4 TATTGTAATTTAGCCAAAATTT Sputw3181_3618
-114 3.8 GAATATGACAGGTTTCACGTTT
Shewanella woodyi ATCC 51908
Position: -345
Score: 3.79525
Sequence: AAGTTTTATCTAGTTAACCCTT
Locus tag: Swoo_4423
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Swoo_4422
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Swoo_4421
Name: mshI
Funciton: MSHA biogenesis protein MshI
SO4118-mshH-mshI -345 3.8 AAGTTTTATCTAGTTAACCCTT Swoo_4423
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