Orthologous regulated operons containing mshI gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella denitrificans OS217 | ||||
|
Position: -298
Score: 3.80615 Sequence: TCTTGTTATTTAAACAACATTT
Position: -197
Score: 4.1877 Sequence: TAATGTGATGCATAGCAGCCTT
Locus tag: Sden_3353
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sden_3352
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sden_3351
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -298 | 3.8 | TCTTGTTATTTAAACAACATTT | Sden_3353 |
| -197 | 4.2 | TAATGTGATGCATAGCAGCCTT | ||
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -303
Score: 4.06916 Sequence: TATTGTTATTTAGACAAAATAA
Locus tag: Sfri_3757
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sfri_3756
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sfri_3755
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -303 | 4.1 | TATTGTTATTTAGACAAAATAA | Sfri_3757 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -196
Score: 3.76172 Sequence: TATAGCGATAAAGTTAAAAAAT
Locus tag: Shal_3859
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Shal_3858
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Shal_3857
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -196 | 3.8 | TATAGCGATAAAGTTAAAAAAT | Shal_3859 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -318
Score: 4.35315 Sequence: TATTGTAATTTAGTCAACATTT
Position: -132
Score: 4.34144 Sequence: AAATGTGACCTAATTGACGTAT
Locus tag: SO4118
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: SO4116
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: SO4114.2
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -318 | 4.4 | TATTGTAATTTAGTCAACATTT | SO4118 |
| -132 | 4.3 | AAATGTGACCTAATTGACGTAT | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -196
Score: 3.76172 Sequence: TATAGCGATAAAGTTAAAAAAT
Locus tag: Spea_3774
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Spea_3773
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Spea_3772
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -196 | 3.8 | TATAGCGATAAAGTTAAAAAAT | Spea_3774 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -313
Score: 3.95742 Sequence: TATTGTAATTTAGCCAAAATTT
Position: -114
Score: 3.80771 Sequence: GAATATGACAGGTTTCACGTTT
Locus tag: Sputcn32_0554
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sputcn32_0555
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sputcn32_0556
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -313 | 4 | TATTGTAATTTAGCCAAAATTT | Sputcn32_0554 |
| -114 | 3.8 | GAATATGACAGGTTTCACGTTT | ||
| Shewanella sp ANA-3 | ||||
|
Position: -312
Score: 4.24117 Sequence: TATTGTAATTTAATCAACATTT
Position: -119
Score: 4.19839 Sequence: GGATATGATGGGTTTCACATTT
Locus tag: Shewana3_3669
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Shewana3_3668
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Shewana3_3667
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -312 | 4.2 | TATTGTAATTTAATCAACATTT | Shewana3_3669 |
| -119 | 4.2 | GGATATGATGGGTTTCACATTT | ||
| Shewanella sp MR-4 | ||||
|
Position: -312
Score: 4.24117 Sequence: TATTGTAATTTAATCAACATTT
Locus tag: Shewmr4_3492
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Shewmr4_3491
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Shewmr4_3490
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -312 | 4.2 | TATTGTAATTTAATCAACATTT | Shewmr4_3492 |
| Shewanella sp MR-7 | ||||
|
Position: -312
Score: 4.24117 Sequence: TATTGTAATTTAATCAACATTT
Locus tag: Shewmr7_0460
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Shewmr7_0461
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Shewmr7_0462
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -312 | 4.2 | TATTGTAATTTAATCAACATTT | Shewmr7_0460 |
| Shewanella sp W3-18-1 | ||||
|
Position: -313
Score: 3.95742 Sequence: TATTGTAATTTAGCCAAAATTT
Position: -114
Score: 3.80771 Sequence: GAATATGACAGGTTTCACGTTT
Locus tag: Sputw3181_3618
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sputw3181_3617
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sputw3181_3616
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -313 | 4 | TATTGTAATTTAGCCAAAATTT | Sputw3181_3618 |
| -114 | 3.8 | GAATATGACAGGTTTCACGTTT | ||
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -345
Score: 3.79525 Sequence: AAGTTTTATCTAGTTAACCCTT
Locus tag: Swoo_4423
Name: SO4118 Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Swoo_4422
Name: mshH Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Swoo_4421
Name: mshI Funciton: MSHA biogenesis protein MshI |
||||
| SO4118-mshH-mshI | -345 | 3.8 | AAGTTTTATCTAGTTAACCCTT | Swoo_4423 |