Orthologous regulated operons containing SO4504 gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -113
Score: 4.02309 Sequence: TTTGATGATCCACTTCAAACTT
Locus tag: Sama_3618
Name: null Funciton: hypothetical protein
Locus tag: Sama_3617
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Sama_3616
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Sama_3615
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Sama_3614
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Sama_3613
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Sama_3612
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sama_3611
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Sama_3618-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -113 | 4 | TTTGATGATCCACTTCAAACTT | Sama_3618 |
| Shewanella baltica OS155 | ||||
|
Position: -136
Score: 4.16838 Sequence: TTTGATGATCTAGTTCAAACTA
Locus tag: Sbal_4131
Name: null Funciton: hypothetical protein
Locus tag: Sbal_4132
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Sbal_4133
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Sbal_4134
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Sbal_4135
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Sbal_4136
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Sbal_4137
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sbal_4138
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Sbal_4131-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -136 | 4.2 | TTTGATGATCTAGTTCAAACTA | Sbal_4131 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -125
Score: 4.18066 Sequence: TTTCGGGATCTAGTTCAAAGTT
Locus tag: Sfri_0052
Name: null Funciton: hypothetical protein
Locus tag: Sfri_0053
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Sfri_0054
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Sfri_0055
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Sfri_0056
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Sfri_0057
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Sfri_0058
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sfri_0059
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Sfri_0052-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -125 | 4.2 | TTTCGGGATCTAGTTCAAAGTT | Sfri_0052 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -124
Score: 4.23962 Sequence: ATAGTTGATCTAGTTCAAACTA
Locus tag: Shal_0100
Name: null Funciton: hypothetical protein
Locus tag: Shal_0101
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Shal_0102
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Shal_0103
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Shal_0104
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Shal_0105
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Shal_0106
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shal_0107
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Shal_0100-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -124 | 4.2 | ATAGTTGATCTAGTTCAAACTA | Shal_0100 |
| Shewanella loihica PV-4 | ||||
|
Position: -127
Score: 4.07924 Sequence: TTTGATGATCCAGTTCAAACTA
Locus tag: Shew_0054
Name: null Funciton: hypothetical protein
Locus tag: Shew_0055
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Shew_0056
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Shew_0057
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Shew_0058
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Shew_0059
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Shew_0060
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shew_0061
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Shew_0054-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -127 | 4.1 | TTTGATGATCCAGTTCAAACTA | Shew_0054 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -130
Score: 3.99462 Sequence: TTTGATGATCCACTTCAAACTA
Locus tag: SO4504
Name: null Funciton: hypothetical protein
Locus tag: SO4505
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: SO4506
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: SO4507
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: SO4508
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: SO4509
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: SO4510
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: SO4511
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| SO4504-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -130 | 4 | TTTGATGATCCACTTCAAACTA | SO4504 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -123
Score: 4.23962 Sequence: ATAGTTGATCTAGTTCAAACTA
Locus tag: Spea_4142
Name: null Funciton: hypothetical protein
Locus tag: Spea_4141
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Spea_4140
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Spea_4139
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Spea_4138
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Spea_4137
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Spea_4136
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Spea_4135
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Spea_4142-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -123 | 4.2 | ATAGTTGATCTAGTTCAAACTA | Spea_4142 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -148
Score: 4.03201 Sequence: TTATGAGATTTCAATTACCTTT
Position: -87
Score: 3.83642 Sequence: AAGTTAGCTGCAGATCACACTT
Locus tag: swp_5035
Name: null Funciton: hypothetical protein swp_5035
Locus tag: swp_5034
Name: null Funciton: hypothetical protein
Locus tag: swp_5033
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: swp_5032
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: swp_5031
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: swp_5030
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: swp_5029
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: swp_5028
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: swp_5027
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| swp_5035-swp_5034-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -148 | 4 | TTATGAGATTTCAATTACCTTT | swp_5035 |
| -87 | 3.8 | AAGTTAGCTGCAGATCACACTT | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -140
Score: 4.11224 Sequence: TTTGATGATCTACTTCAAACTT
Locus tag: Sputcn32_0342
Name: null Funciton: hypothetical protein
Locus tag: Sputcn32_0341
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Sputcn32_0340
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Sputcn32_0339
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Sputcn32_0338
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Sputcn32_0337
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Sputcn32_0336
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sputcn32_0335
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Sputcn32_0342-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -140 | 4.1 | TTTGATGATCTACTTCAAACTT | Sputcn32_0342 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -217
Score: 4.07283 Sequence: ATGCGTGATCTCTCTCATTTAA
Position: -123
Score: 3.86645 Sequence: ATTGATGATCCAGCTCAAGTTA
Locus tag: Ssed_4426
Name: null Funciton: hypothetical protein
Locus tag: Ssed_4425
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Ssed_4424
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Ssed_4423
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Ssed_4422
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Ssed_4421
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Ssed_4420
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Ssed_4419
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Ssed_4426-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -217 | 4.1 | ATGCGTGATCTCTCTCATTTAA | Ssed_4426 |
| -123 | 3.9 | ATTGATGATCCAGCTCAAGTTA | ||
| Shewanella sp ANA-3 | ||||
|
Position: -225
Score: 3.76818 Sequence: ATGCGTGATCCGTCGCAATTAT
Position: -131
Score: 3.94831 Sequence: TTTGATGATCCACCTCAAACAA
Locus tag: Shewana3_3911
Name: null Funciton: hypothetical protein
Locus tag: Shewana3_3912
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Shewana3_3913
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Shewana3_3914
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Shewana3_3915
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Shewana3_3916
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Shewana3_3917
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shewana3_3918
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Shewana3_3911-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -225 | 3.8 | ATGCGTGATCCGTCGCAATTAT | Shewana3_3911 |
| -131 | 3.9 | TTTGATGATCCACCTCAAACAA | ||
| Shewanella sp MR-4 | ||||
|
Position: -225
Score: 3.76818 Sequence: ATGCGTGATCCGTCGCAATTAT
Position: -131
Score: 3.94831 Sequence: TTTGATGATCCACCTCAAACAA
Locus tag: Shewmr4_3715
Name: null Funciton: hypothetical protein
Locus tag: Shewmr4_3716
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Shewmr4_3717
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Shewmr4_3718
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Shewmr4_3719
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Shewmr4_3720
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Shewmr4_3721
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shewmr4_3722
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Shewmr4_3715-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -225 | 3.8 | ATGCGTGATCCGTCGCAATTAT | Shewmr4_3715 |
| -131 | 3.9 | TTTGATGATCCACCTCAAACAA | ||
| Shewanella sp MR-7 | ||||
|
Position: -225
Score: 3.76818 Sequence: ATGCGTGATCCGTCGCAATTAT
Position: -131
Score: 3.94831 Sequence: TTTGATGATCCACCTCAAACAA
Locus tag: Shewmr7_3786
Name: null Funciton: hypothetical protein
Locus tag: Shewmr7_3787
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Shewmr7_3788
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Shewmr7_3789
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Shewmr7_3790
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Shewmr7_3791
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Shewmr7_3792
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Shewmr7_3793
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Shewmr7_3786-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -225 | 3.8 | ATGCGTGATCCGTCGCAATTAT | Shewmr7_3786 |
| -131 | 3.9 | TTTGATGATCCACCTCAAACAA | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -140
Score: 4.11224 Sequence: TTTGATGATCTACTTCAAACTT
Locus tag: Sputw3181_3866
Name: null Funciton: hypothetical protein
Locus tag: Sputw3181_3867
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Sputw3181_3868
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Sputw3181_3869
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Sputw3181_3870
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Sputw3181_3871
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Sputw3181_3872
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sputw3181_3873
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Sputw3181_3866-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -140 | 4.1 | TTTGATGATCTACTTCAAACTT | Sputw3181_3866 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -148
Score: 4.23717 Sequence: TTTGATGATCTAGCTCAAAAAA
Locus tag: Swoo_4818
Name: null Funciton: hypothetical protein
Locus tag: Swoo_4817
Name: SO4505 Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Swoo_4816
Name: SO4506 Funciton: iron-sulfur cluster-binding protein
Locus tag: Swoo_4815
Name: SO4507 Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Swoo_4814
Name: SO4508 Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Swoo_4813
Name: SO4509 Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Swoo_4812
Name: fdhB-1 Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Swoo_4811
Name: SO4511 Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) |
||||
| Swoo_4818-SO4505-SO4506-SO4507-SO4508-SO4509-fdhB-1-SO4511 | -148 | 4.2 | TTTGATGATCTAGCTCAAAAAA | Swoo_4818 |