Orthologous regulated operons containing deoA gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -135
Score: 3.9367 Sequence: ATTTGTGATCCGCGTCGAAACG
Locus tag: Sama_0974
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sama_0975
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Sama_0976
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -135 | 3.9 | ATTTGTGATCCGCGTCGAAACG | Sama_0974 |
| Shewanella baltica OS155 | ||||
|
Position: -136
Score: 3.72137 Sequence: AAGTGTGACCTAAATCTATTTG
Locus tag: Sbal_3226
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sbal_3225
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Sbal_3224
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -136 | 3.7 | AAGTGTGACCTAAATCTATTTG | Sbal_3226 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -138
Score: 4.84035 Sequence: AAGTGTGATCTAAATCTAATTA
Locus tag: Shal_3135
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shal_3134
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Shal_3133
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -138 | 4.8 | AAGTGTGATCTAAATCTAATTA | Shal_3135 |
| Shewanella loihica PV-4 | ||||
|
Position: -133
Score: 3.97801 Sequence: AAGTGTGATCTAAATCTATTTG
Locus tag: Shew_2814
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shew_2813
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Shew_2812
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -133 | 4 | AAGTGTGATCTAAATCTATTTG | Shew_2814 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -135
Score: 3.9166 Sequence: AAGTGTGACCTAAATCTAGTTG
Locus tag: SO1218
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: SO1219
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: SO1221
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -135 | 3.9 | AAGTGTGACCTAAATCTAGTTG | SO1218 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -138
Score: 4.84035 Sequence: AAGTGTGATCTAAATCTAATTA
Locus tag: Spea_3047
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Spea_3046
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Spea_3045
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -138 | 4.8 | AAGTGTGATCTAAATCTAATTA | Spea_3047 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -139
Score: 4.84035 Sequence: AAGTGTGATCTAAATCTAATTA
Locus tag: swp_1230
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: swp_1231
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: swp_1232
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -139 | 4.8 | AAGTGTGATCTAAATCTAATTA | swp_1230 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -136
Score: 3.72137 Sequence: AAGTGTGACCTAAATCTATTTG
Locus tag: Sputcn32_2821
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sputcn32_2820
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Sputcn32_2819
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -136 | 3.7 | AAGTGTGACCTAAATCTATTTG | Sputcn32_2821 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -134
Score: 3.97801 Sequence: AAGTGTGATCTAAATCTATTTG
Locus tag: Ssed_3377
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Ssed_3376
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Ssed_3375
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -134 | 4 | AAGTGTGATCTAAATCTATTTG | Ssed_3377 |
| Shewanella sp ANA-3 | ||||
|
Position: -135
Score: 3.9166 Sequence: AAGTGTGACCTAAATCTAGTTG
Locus tag: Shewana3_1042
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewana3_1043
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewana3_1044
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -135 | 3.9 | AAGTGTGACCTAAATCTAGTTG | Shewana3_1042 |
| Shewanella sp MR-4 | ||||
|
Position: -135
Score: 3.9166 Sequence: AAGTGTGACCTAAATCTAGTTG
Locus tag: Shewmr4_1038
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewmr4_1039
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewmr4_1040
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -135 | 3.9 | AAGTGTGACCTAAATCTAGTTG | Shewmr4_1038 |
| Shewanella sp MR-7 | ||||
|
Position: -135
Score: 3.9166 Sequence: AAGTGTGACCTAAATCTAGTTG
Locus tag: Shewmr7_1103
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewmr7_1104
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewmr7_1105
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -135 | 3.9 | AAGTGTGACCTAAATCTAGTTG | Shewmr7_1103 |
| Shewanella sp W3-18-1 | ||||
|
Position: -136
Score: 3.72137 Sequence: AAGTGTGACCTAAATCTATTTG
Locus tag: Sputw3181_1190
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sputw3181_1191
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Sputw3181_1192
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -136 | 3.7 | AAGTGTGACCTAAATCTATTTG | Sputw3181_1190 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -157
Score: 4.17323 Sequence: AAGTGTGATCTAAATCTAGTTG
Locus tag: Swoo_3548
Name: deoA Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Swoo_3547
Name: deoB Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Swoo_3546
Name: deoD-2 Funciton: purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD-2 | -157 | 4.2 | AAGTGTGATCTAAATCTAGTTG | Swoo_3548 |