Orthologous regulated operons containing SO0355 gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella baltica OS155 | ||||
|
Position: -73
Score: 3.84693 Sequence: CTATTTGCGCGGGCTCACAAAA
Locus tag: Sbal_0351
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sbal_0350
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
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| SO0355-SO0354 | -73 | 3.8 | CTATTTGCGCGGGCTCACAAAA | Sbal_0351 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -51
Score: 4.33198 Sequence: TTGTGTTACCTAGCACACATAT
Locus tag: Sfri_0361
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sfri_0360
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
||||
| SO0355-SO0354 | -51 | 4.3 | TTGTGTTACCTAGCACACATAT | Sfri_0361 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -124
Score: 4.31365 Sequence: AAGTTTGTCTTAGATCACATTT
Locus tag: Shal_0387
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Shal_0386
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
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| SO0355-SO0354 | -124 | 4.3 | AAGTTTGTCTTAGATCACATTT | Shal_0387 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -84
Score: 4.43193 Sequence: TTATTTGCGCTACATCACAAAA
Locus tag: SO0355
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: SO0354
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
||||
| SO0355-SO0354 | -84 | 4.4 | TTATTTGCGCTACATCACAAAA | SO0355 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -124
Score: 4.31365 Sequence: AAGTTTGTCTTAGATCACATTT
Locus tag: Spea_3882
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Spea_3883
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
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| SO0355-SO0354 | -124 | 4.3 | AAGTTTGTCTTAGATCACATTT | Spea_3882 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -127
Score: 3.89754 Sequence: AAAGTTGTCATAGATCACATTT
Locus tag: swp_0315
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: swp_0314
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
||||
| SO0355-SO0354 | -127 | 3.9 | AAAGTTGTCATAGATCACATTT | swp_0315 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -84
Score: 3.77566 Sequence: CTATTTGCGCAGCATCACAAAA
Position: -45
Score: 3.94591 Sequence: TAAAGTGATGGGGTAAAAATAA
Locus tag: Sputcn32_3634
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sputcn32_3635
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
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| SO0355-SO0354 | -84 | 3.8 | CTATTTGCGCAGCATCACAAAA | Sputcn32_3634 |
| -45 | 3.9 | TAAAGTGATGGGGTAAAAATAA | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -110
Score: 3.92086 Sequence: GAATTTGTCATAGATCACATTT
Locus tag: Ssed_0331
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Ssed_0330
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
||||
| SO0355-SO0354 | -110 | 3.9 | GAATTTGTCATAGATCACATTT | Ssed_0331 |
| Shewanella sp W3-18-1 | ||||
|
Position: -84
Score: 3.77566 Sequence: CTATTTGCGCAGCATCACAAAA
Position: -45
Score: 3.94591 Sequence: TAAAGTGATGGGGTAAAAATAA
Locus tag: Sputw3181_3774
Name: SO0355 Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sputw3181_3775
Name: SO0354 Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter |
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| SO0355-SO0354 | -84 | 3.8 | CTATTTGCGCAGCATCACAAAA | Sputw3181_3774 |
| -45 | 3.9 | TAAAGTGATGGGGTAAAAATAA | ||