Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0355 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -73
Score: 3.84693
Sequence: CTATTTGCGCGGGCTCACAAAA
Locus tag: Sbal_0351
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sbal_0350
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -73 3.8 CTATTTGCGCGGGCTCACAAAA Sbal_0351
Shewanella frigidimarina NCIMB 400
Position: -51
Score: 4.33198
Sequence: TTGTGTTACCTAGCACACATAT
Locus tag: Sfri_0361
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sfri_0360
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -51 4.3 TTGTGTTACCTAGCACACATAT Sfri_0361
Shewanella halifaxensis HAW-EB4
Position: -124
Score: 4.31365
Sequence: AAGTTTGTCTTAGATCACATTT
Locus tag: Shal_0387
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Shal_0386
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -124 4.3 AAGTTTGTCTTAGATCACATTT Shal_0387
Shewanella oneidensis MR-1
Position: -84
Score: 4.43193
Sequence: TTATTTGCGCTACATCACAAAA
Locus tag: SO0355
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: SO0354
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -84 4.4 TTATTTGCGCTACATCACAAAA SO0355
Shewanella pealeana ATCC 700345
Position: -124
Score: 4.31365
Sequence: AAGTTTGTCTTAGATCACATTT
Locus tag: Spea_3882
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Spea_3883
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -124 4.3 AAGTTTGTCTTAGATCACATTT Spea_3882
Shewanella piezotolerans WP3
Position: -127
Score: 3.89754
Sequence: AAAGTTGTCATAGATCACATTT
Locus tag: swp_0315
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: swp_0314
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -127 3.9 AAAGTTGTCATAGATCACATTT swp_0315
Shewanella putrefaciens CN-32
Position: -84
Score: 3.77566
Sequence: CTATTTGCGCAGCATCACAAAA
Position: -45
Score: 3.94591
Sequence: TAAAGTGATGGGGTAAAAATAA
Locus tag: Sputcn32_3634
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sputcn32_3635
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -84 3.8 CTATTTGCGCAGCATCACAAAA Sputcn32_3634
-45 3.9 TAAAGTGATGGGGTAAAAATAA
Shewanella sediminis HAW-EB3
Position: -110
Score: 3.92086
Sequence: GAATTTGTCATAGATCACATTT
Locus tag: Ssed_0331
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Ssed_0330
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -110 3.9 GAATTTGTCATAGATCACATTT Ssed_0331
Shewanella sp W3-18-1
Position: -84
Score: 3.77566
Sequence: CTATTTGCGCAGCATCACAAAA
Position: -45
Score: 3.94591
Sequence: TAAAGTGATGGGGTAAAAATAA
Locus tag: Sputw3181_3774
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sputw3181_3775
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355-SO0354 -84 3.8 CTATTTGCGCAGCATCACAAAA Sputw3181_3774
-45 3.9 TAAAGTGATGGGGTAAAAATAA
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