Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3588 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella frigidimarina NCIMB 400
Position: -313
Score: 3.79207
Sequence: TTTTGAGACTTATCACACCAAT
Locus tag: Sfri_3630
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -313 3.8 TTTTGAGACTTATCACACCAAT Sfri_3630
Shewanella loihica PV-4
Position: -97
Score: 4.3868
Sequence: TATTGTGATGCCCTTAAGACTT
Locus tag: Shew_0904
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -97 4.4 TATTGTGATGCCCTTAAGACTT Shew_0904
Shewanella pealeana ATCC 700345
Position: -246
Score: 3.79655
Sequence: TGGCGTGACGTGTGTCACTCTT
Locus tag: Spea_0890
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -246 3.8 TGGCGTGACGTGTGTCACTCTT Spea_0890
Shewanella putrefaciens CN-32
Position: -312
Score: 4.11986
Sequence: AATTTTGAACCAATGCAAATAT
Position: -44
Score: 4.31151
Sequence: TATTTTGATTTTAATCAATTTA
Locus tag: Sputcn32_1014
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -312 4.1 AATTTTGAACCAATGCAAATAT Sputcn32_1014
-44 4.3 TATTTTGATTTTAATCAATTTA
Shewanella sp ANA-3
Position: -117
Score: 4.17388
Sequence: TATTTTGATTGTGATCTCTTTA
Locus tag: Shewana3_3180
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -117 4.2 TATTTTGATTGTGATCTCTTTA Shewana3_3180
Shewanella sp MR-4
Position: -292
Score: 3.79367
Sequence: AAGTTTGAACCTTAGCAAAATT
Locus tag: Shewmr4_3002
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -292 3.8 AAGTTTGAACCTTAGCAAAATT Shewmr4_3002
Shewanella sp MR-7
Position: -292
Score: 3.79367
Sequence: AAGTTTGAACCTTAGCAAAATT
Locus tag: Shewmr7_3083
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -292 3.8 AAGTTTGAACCTTAGCAAAATT Shewmr7_3083
Shewanella sp W3-18-1
Position: -312
Score: 4.11986
Sequence: AATTTTGAACCAATGCAAATAT
Position: -44
Score: 4.31151
Sequence: TATTTTGATTTTAATCAATTTA
Locus tag: Sputw3181_3151
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -312 4.1 AATTTTGAACCAATGCAAATAT Sputw3181_3151
-44 4.3 TATTTTGATTTTAATCAATTTA
Shewanella woodyi ATCC 51908
Position: -309
Score: 3.88454
Sequence: TTGTGTGATAAGGGTCTTGTTT
Position: -206
Score: 3.861
Sequence: TTATGTGATGAATGATTCATTT
Locus tag: Swoo_1050
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
SO3588 -309 3.9 TTGTGTGATAAGGGTCTTGTTT Swoo_1050
-206 3.9 TTATGTGATGAATGATTCATTT
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