Orthologous regulated operons containing hmgR gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -135
Score: 4.73147 Sequence: ATATGTGATCTGGGTATCAATT
Locus tag: Sama_1570
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -135 | 4.7 | ATATGTGATCTGGGTATCAATT | Sama_1570 |
| Shewanella baltica OS155 | ||||
|
Position: -148
Score: 4.67097 Sequence: TAGTGTGATCTTGTTATCAATT
Locus tag: Sbal_2614
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -148 | 4.7 | TAGTGTGATCTTGTTATCAATT | Sbal_2614 |
| Shewanella denitrificans OS217 | ||||
|
Position: -146
Score: 4.28879 Sequence: CGTTGTGATCTAGCTATCAATT
Locus tag: Sden_2161
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -146 | 4.3 | CGTTGTGATCTAGCTATCAATT | Sden_2161 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -135
Score: 5.09465 Sequence: ATATGTGATCTAACTTACAATT
Locus tag: Sfri_2325
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -135 | 5.1 | ATATGTGATCTAACTTACAATT | Sfri_2325 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -114
Score: 4.54851 Sequence: TAATGTGATCTAGCTTTAATTT
Locus tag: Shal_2408
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -114 | 4.5 | TAATGTGATCTAGCTTTAATTT | Shal_2408 |
| Shewanella loihica PV-4 | ||||
|
Position: -115
Score: 5.11129 Sequence: TTATGTGATCTAAGTAACAATT
Locus tag: Shew_2153
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -115 | 5.1 | TTATGTGATCTAAGTAACAATT | Shew_2153 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -148
Score: 4.41729 Sequence: TACTGTGATCTTCTTATCAATT
Locus tag: SO1965
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -148 | 4.4 | TACTGTGATCTTCTTATCAATT | SO1965 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -114
Score: 4.25516 Sequence: TAATGTGATCTAGGTTCAATTT
Locus tag: Spea_1875
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -114 | 4.3 | TAATGTGATCTAGGTTCAATTT | Spea_1875 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -115
Score: 4.87543 Sequence: TAATGTGATCTTGTTATCAATT
Locus tag: swp_2869
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -115 | 4.9 | TAATGTGATCTTGTTATCAATT | swp_2869 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -148
Score: 4.82625 Sequence: TTATGTGATCTTGTTATCAATT
Locus tag: Sputcn32_1672
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -148 | 4.8 | TTATGTGATCTTGTTATCAATT | Sputcn32_1672 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -116
Score: 4.46349 Sequence: ATTTGTGACATACCTATCAATT
Locus tag: Ssed_2686
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -116 | 4.5 | ATTTGTGACATACCTATCAATT | Ssed_2686 |
| Shewanella sp ANA-3 | ||||
|
Position: -148
Score: 4.58635 Sequence: TAGTGTGATCTTCTTATCAATT
Position: -92
Score: 3.89869 Sequence: ATCTGTTATCTCAATCTAAAAA
Locus tag: Shewana3_2480
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -148 | 4.6 | TAGTGTGATCTTCTTATCAATT | Shewana3_2480 |
| -92 | 3.9 | ATCTGTTATCTCAATCTAAAAA | ||
| Shewanella sp MR-4 | ||||
|
Position: -148
Score: 4.58635 Sequence: TAGTGTGATCTTCTTATCAATT
Position: -92
Score: 3.89869 Sequence: ATCTGTTATCTCAATCTAAAAA
Locus tag: Shewmr4_2290
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -148 | 4.6 | TAGTGTGATCTTCTTATCAATT | Shewmr4_2290 |
| -92 | 3.9 | ATCTGTTATCTCAATCTAAAAA | ||
| Shewanella sp MR-7 | ||||
|
Position: -148
Score: 4.58635 Sequence: TAGTGTGATCTTCTTATCAATT
Position: -92
Score: 3.93857 Sequence: ATCTGTTATCTCTATCTAAAAA
Locus tag: Shewmr7_2362
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -148 | 4.6 | TAGTGTGATCTTCTTATCAATT | Shewmr7_2362 |
| -92 | 3.9 | ATCTGTTATCTCTATCTAAAAA | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -148
Score: 4.82625 Sequence: TTATGTGATCTTGTTATCAATT
Locus tag: Sputw3181_2353
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -148 | 4.8 | TTATGTGATCTTGTTATCAATT | Sputw3181_2353 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -116
Score: 4.45334 Sequence: ATGTGTGATCTAAGTATCAATT
Locus tag: Swoo_1933
Name: hmgR Funciton: Tyrosine degradation transcriptional regulator, LysR family |
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| hmgR | -116 | 4.5 | ATGTGTGATCTAAGTATCAATT | Swoo_1933 |