Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hmgR gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -135
Score: 4.73147
Sequence: ATATGTGATCTGGGTATCAATT
Locus tag: Sama_1570
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -135 4.7 ATATGTGATCTGGGTATCAATT Sama_1570
Shewanella baltica OS155
Position: -148
Score: 4.67097
Sequence: TAGTGTGATCTTGTTATCAATT
Locus tag: Sbal_2614
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -148 4.7 TAGTGTGATCTTGTTATCAATT Sbal_2614
Shewanella denitrificans OS217
Position: -146
Score: 4.28879
Sequence: CGTTGTGATCTAGCTATCAATT
Locus tag: Sden_2161
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -146 4.3 CGTTGTGATCTAGCTATCAATT Sden_2161
Shewanella frigidimarina NCIMB 400
Position: -135
Score: 5.09465
Sequence: ATATGTGATCTAACTTACAATT
Locus tag: Sfri_2325
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -135 5.1 ATATGTGATCTAACTTACAATT Sfri_2325
Shewanella halifaxensis HAW-EB4
Position: -114
Score: 4.54851
Sequence: TAATGTGATCTAGCTTTAATTT
Locus tag: Shal_2408
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -114 4.5 TAATGTGATCTAGCTTTAATTT Shal_2408
Shewanella loihica PV-4
Position: -115
Score: 5.11129
Sequence: TTATGTGATCTAAGTAACAATT
Locus tag: Shew_2153
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -115 5.1 TTATGTGATCTAAGTAACAATT Shew_2153
Shewanella oneidensis MR-1
Position: -148
Score: 4.41729
Sequence: TACTGTGATCTTCTTATCAATT
Locus tag: SO1965
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -148 4.4 TACTGTGATCTTCTTATCAATT SO1965
Shewanella pealeana ATCC 700345
Position: -114
Score: 4.25516
Sequence: TAATGTGATCTAGGTTCAATTT
Locus tag: Spea_1875
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -114 4.3 TAATGTGATCTAGGTTCAATTT Spea_1875
Shewanella piezotolerans WP3
Position: -115
Score: 4.87543
Sequence: TAATGTGATCTTGTTATCAATT
Locus tag: swp_2869
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -115 4.9 TAATGTGATCTTGTTATCAATT swp_2869
Shewanella putrefaciens CN-32
Position: -148
Score: 4.82625
Sequence: TTATGTGATCTTGTTATCAATT
Locus tag: Sputcn32_1672
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -148 4.8 TTATGTGATCTTGTTATCAATT Sputcn32_1672
Shewanella sediminis HAW-EB3
Position: -116
Score: 4.46349
Sequence: ATTTGTGACATACCTATCAATT
Locus tag: Ssed_2686
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -116 4.5 ATTTGTGACATACCTATCAATT Ssed_2686
Shewanella sp ANA-3
Position: -148
Score: 4.58635
Sequence: TAGTGTGATCTTCTTATCAATT
Position: -92
Score: 3.89869
Sequence: ATCTGTTATCTCAATCTAAAAA
Locus tag: Shewana3_2480
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -148 4.6 TAGTGTGATCTTCTTATCAATT Shewana3_2480
-92 3.9 ATCTGTTATCTCAATCTAAAAA
Shewanella sp MR-4
Position: -148
Score: 4.58635
Sequence: TAGTGTGATCTTCTTATCAATT
Position: -92
Score: 3.89869
Sequence: ATCTGTTATCTCAATCTAAAAA
Locus tag: Shewmr4_2290
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -148 4.6 TAGTGTGATCTTCTTATCAATT Shewmr4_2290
-92 3.9 ATCTGTTATCTCAATCTAAAAA
Shewanella sp MR-7
Position: -148
Score: 4.58635
Sequence: TAGTGTGATCTTCTTATCAATT
Position: -92
Score: 3.93857
Sequence: ATCTGTTATCTCTATCTAAAAA
Locus tag: Shewmr7_2362
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -148 4.6 TAGTGTGATCTTCTTATCAATT Shewmr7_2362
-92 3.9 ATCTGTTATCTCTATCTAAAAA
Shewanella sp W3-18-1
Position: -148
Score: 4.82625
Sequence: TTATGTGATCTTGTTATCAATT
Locus tag: Sputw3181_2353
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -148 4.8 TTATGTGATCTTGTTATCAATT Sputw3181_2353
Shewanella woodyi ATCC 51908
Position: -116
Score: 4.45334
Sequence: ATGTGTGATCTAAGTATCAATT
Locus tag: Swoo_1933
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR -116 4.5 ATGTGTGATCTAAGTATCAATT Swoo_1933
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