Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ompW gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -56
Score: 4.00292
Sequence: AATTGTTACGGACGTAACAGAA
Locus tag: Sama_1371
Name: ompW
Funciton: outer membrane protein W precursor
ompW -56 4 AATTGTTACGGACGTAACAGAA Sama_1371
Shewanella baltica OS155
Position: -158
Score: 3.97688
Sequence: TTTCGTGATTCAGCTCCCATGT
Locus tag: Sbal_1490
Name: ompW
Funciton: outer membrane protein W precursor
ompW -158 4 TTTCGTGATTCAGCTCCCATGT Sbal_1490
Shewanella denitrificans OS217
Position: -157
Score: 4.19298
Sequence: TTTTGTGAATTAGATCAAGACT
Locus tag: Sden_2589
Name: ompW
Funciton: outer membrane protein W precursor
ompW -157 4.2 TTTTGTGAATTAGATCAAGACT Sden_2589
Shewanella frigidimarina NCIMB 400
Position: -232
Score: 3.94946
Sequence: TCGCTTGATCAACCTCACAAAA
Position: -170
Score: 3.86016
Sequence: TTTTGTGATCCAAATCAACAGC
Locus tag: Sfri_1334
Name: ompW
Funciton: outer membrane protein W precursor
ompW -232 3.9 TCGCTTGATCAACCTCACAAAA Sfri_1334
-170 3.9 TTTTGTGATCCAAATCAACAGC
Shewanella halifaxensis HAW-EB4
Position: -161
Score: 5.07813
Sequence: AAATGTGATCTTCATCGCCTTT
Position: -111
Score: 4.7546
Sequence: ATTTTTGATTCAGGTCAAATTT
Locus tag: Shal_2887
Name: ompW
Funciton: outer membrane protein W precursor
ompW -161 5.1 AAATGTGATCTTCATCGCCTTT Shal_2887
-111 4.8 ATTTTTGATTCAGGTCAAATTT
Shewanella oneidensis MR-1
Position: -161
Score: 4.44852
Sequence: TAGCGTGATTTGGATCTCAATG
Position: -110
Score: 4.43661
Sequence: AATTTTGATTTGGATCAATAAT
Locus tag: SO1673
Name: ompW
Funciton: outer membrane protein W precursor
ompW -161 4.4 TAGCGTGATTTGGATCTCAATG SO1673
-110 4.4 AATTTTGATTTGGATCAATAAT
Shewanella pealeana ATCC 700345
Position: -159
Score: 4.35784
Sequence: TATTGTGATCTAGATCCTTTTA
Locus tag: Spea_2787
Name: ompW
Funciton: outer membrane protein W precursor
ompW -159 4.4 TATTGTGATCTAGATCCTTTTA Spea_2787
Shewanella piezotolerans WP3
Position: -214
Score: 3.95896
Sequence: TTGCGTGTTGTATGTCACCAAA
Position: -161
Score: 4.37755
Sequence: AAATGTGATCGCGATCACTGCT
Locus tag: swp_3395
Name: ompW
Funciton: outer membrane protein W precursor
ompW -214 4 TTGCGTGTTGTATGTCACCAAA swp_3395
-161 4.4 AAATGTGATCGCGATCACTGCT
Shewanella putrefaciens CN-32
Position: -211
Score: 4.17307
Sequence: ATAAATGCTGCGTATCACATAA
Position: -158
Score: 3.9843
Sequence: TTTCGTGATTAGGATCTCAAGT
Locus tag: Sputcn32_1392
Name: ompW
Funciton: outer membrane protein W precursor
ompW -211 4.2 ATAAATGCTGCGTATCACATAA Sputcn32_1392
-158 4 TTTCGTGATTAGGATCTCAAGT
Shewanella sediminis HAW-EB3
Position: -158
Score: 4.47541
Sequence: TTTTGTGAGCTTGGTCATGTAT
Position: -108
Score: 3.69368
Sequence: TTAATTGATCTGGATCAATAAG
Locus tag: Ssed_1469
Name: ompW
Funciton: outer membrane protein W precursor
ompW -158 4.5 TTTTGTGAGCTTGGTCATGTAT Ssed_1469
-108 3.7 TTAATTGATCTGGATCAATAAG
Shewanella sp ANA-3
Position: -107
Score: 3.77208
Sequence: AATCTTGATTTGGATCAATAAG
Locus tag: Shewana3_2775
Name: ompW
Funciton: outer membrane protein W precursor
ompW -107 3.8 AATCTTGATTTGGATCAATAAG Shewana3_2775
Shewanella sp W3-18-1
Position: -211
Score: 4.17307
Sequence: ATAAATGCTGCGTATCACATAA
Locus tag: Sputw3181_2709
Name: ompW
Funciton: outer membrane protein W precursor
ompW -211 4.2 ATAAATGCTGCGTATCACATAA Sputw3181_2709
Shewanella woodyi ATCC 51908
Position: -211
Score: 4.28408
Sequence: AATTATGACGTCGCTCACTAAA
Position: -158
Score: 4.48767
Sequence: AAGTGTGAGTTCGATCAAGTAT
Position: -108
Score: 3.92277
Sequence: TTTATTGATTTGGATCAATAAA
Locus tag: Swoo_3207
Name: ompW
Funciton: outer membrane protein W precursor
ompW -211 4.3 AATTATGACGTCGCTCACTAAA Swoo_3207
-158 4.5 AAGTGTGAGTTCGATCAAGTAT
-108 3.9 TTTATTGATTTGGATCAATAAA
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