Orthologous regulated operons containing ompW gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -56
Score: 4.00292 Sequence: AATTGTTACGGACGTAACAGAA
Locus tag: Sama_1371
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -56 | 4 | AATTGTTACGGACGTAACAGAA | Sama_1371 |
| Shewanella baltica OS155 | ||||
|
Position: -158
Score: 3.97688 Sequence: TTTCGTGATTCAGCTCCCATGT
Locus tag: Sbal_1490
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -158 | 4 | TTTCGTGATTCAGCTCCCATGT | Sbal_1490 |
| Shewanella denitrificans OS217 | ||||
|
Position: -157
Score: 4.19298 Sequence: TTTTGTGAATTAGATCAAGACT
Locus tag: Sden_2589
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -157 | 4.2 | TTTTGTGAATTAGATCAAGACT | Sden_2589 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -232
Score: 3.94946 Sequence: TCGCTTGATCAACCTCACAAAA
Position: -170
Score: 3.86016 Sequence: TTTTGTGATCCAAATCAACAGC
Locus tag: Sfri_1334
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -232 | 3.9 | TCGCTTGATCAACCTCACAAAA | Sfri_1334 |
| -170 | 3.9 | TTTTGTGATCCAAATCAACAGC | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -161
Score: 5.07813 Sequence: AAATGTGATCTTCATCGCCTTT
Position: -111
Score: 4.7546 Sequence: ATTTTTGATTCAGGTCAAATTT
Locus tag: Shal_2887
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -161 | 5.1 | AAATGTGATCTTCATCGCCTTT | Shal_2887 |
| -111 | 4.8 | ATTTTTGATTCAGGTCAAATTT | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -161
Score: 4.44852 Sequence: TAGCGTGATTTGGATCTCAATG
Position: -110
Score: 4.43661 Sequence: AATTTTGATTTGGATCAATAAT
Locus tag: SO1673
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -161 | 4.4 | TAGCGTGATTTGGATCTCAATG | SO1673 |
| -110 | 4.4 | AATTTTGATTTGGATCAATAAT | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -159
Score: 4.35784 Sequence: TATTGTGATCTAGATCCTTTTA
Locus tag: Spea_2787
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -159 | 4.4 | TATTGTGATCTAGATCCTTTTA | Spea_2787 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -214
Score: 3.95896 Sequence: TTGCGTGTTGTATGTCACCAAA
Position: -161
Score: 4.37755 Sequence: AAATGTGATCGCGATCACTGCT
Locus tag: swp_3395
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -214 | 4 | TTGCGTGTTGTATGTCACCAAA | swp_3395 |
| -161 | 4.4 | AAATGTGATCGCGATCACTGCT | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -211
Score: 4.17307 Sequence: ATAAATGCTGCGTATCACATAA
Position: -158
Score: 3.9843 Sequence: TTTCGTGATTAGGATCTCAAGT
Locus tag: Sputcn32_1392
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -211 | 4.2 | ATAAATGCTGCGTATCACATAA | Sputcn32_1392 |
| -158 | 4 | TTTCGTGATTAGGATCTCAAGT | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -158
Score: 4.47541 Sequence: TTTTGTGAGCTTGGTCATGTAT
Position: -108
Score: 3.69368 Sequence: TTAATTGATCTGGATCAATAAG
Locus tag: Ssed_1469
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -158 | 4.5 | TTTTGTGAGCTTGGTCATGTAT | Ssed_1469 |
| -108 | 3.7 | TTAATTGATCTGGATCAATAAG | ||
| Shewanella sp ANA-3 | ||||
|
Position: -107
Score: 3.77208 Sequence: AATCTTGATTTGGATCAATAAG
Locus tag: Shewana3_2775
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -107 | 3.8 | AATCTTGATTTGGATCAATAAG | Shewana3_2775 |
| Shewanella sp W3-18-1 | ||||
|
Position: -211
Score: 4.17307 Sequence: ATAAATGCTGCGTATCACATAA
Locus tag: Sputw3181_2709
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -211 | 4.2 | ATAAATGCTGCGTATCACATAA | Sputw3181_2709 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -211
Score: 4.28408 Sequence: AATTATGACGTCGCTCACTAAA
Position: -158
Score: 4.48767 Sequence: AAGTGTGAGTTCGATCAAGTAT
Position: -108
Score: 3.92277 Sequence: TTTATTGATTTGGATCAATAAA
Locus tag: Swoo_3207
Name: ompW Funciton: outer membrane protein W precursor |
||||
| ompW | -211 | 4.3 | AATTATGACGTCGCTCACTAAA | Swoo_3207 |
| -158 | 4.5 | AAGTGTGAGTTCGATCAAGTAT | ||
| -108 | 3.9 | TTTATTGATTTGGATCAATAAA | ||