Orthologous regulated operons containing SO1603 gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -265
Score: 4.18363 Sequence: ATGTTTGAGCTAGATCACTCTT
Locus tag: Shal_3007
Name: SO1603 Funciton: putative transcriptional regulator, inferred for PFA pathway
Locus tag: Shal_3008
Name: SO1602 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Shal_3009
Name: Sputcn32_1325 Funciton: omega-3 polyunsaturated fatty acid synthase PfaB
Locus tag: Shal_3010
Name: SO1599 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC |
||||
| SO1603-SO1602-Sputcn32_1325-SO1599 | -265 | 4.2 | ATGTTTGAGCTAGATCACTCTT | Shal_3007 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -269
Score: 3.94269 Sequence: AAGCAAGATTTAGATCACACTT
Locus tag: Spea_2906
Name: SO1603 Funciton: putative transcriptional regulator, inferred for PFA pathway
Locus tag: Spea_2907
Name: SO1602 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Spea_2908
Name: Sputcn32_1325 Funciton: omega-3 polyunsaturated fatty acid synthase PfaB
Locus tag: Spea_2909
Name: SO1599 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
Locus tag: Spea_2910
Name: SO1597 Funciton: enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), inferred for PFA pathway |
||||
| SO1603-SO1602-Sputcn32_1325-SO1599-SO1597 | -269 | 3.9 | AAGCAAGATTTAGATCACACTT | Spea_2906 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -268
Score: 4.51561 Sequence: ATATTAGATCTAAATCACACTT
Position: -238
Score: 3.86477 Sequence: TAACGTTAGTTACCACACAAAA
Locus tag: swp_3549
Name: SO1603 Funciton: putative transcriptional regulator, inferred for PFA pathway
Locus tag: swp_3550
Name: SO1602 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: swp_3551
Name: Sputcn32_1325 Funciton: omega-3 polyunsaturated fatty acid synthase PfaB
Locus tag: swp_3553
Name: SO1599 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC |
||||
| SO1603-SO1602-Sputcn32_1325-SO1599 | -268 | 4.5 | ATATTAGATCTAAATCACACTT | swp_3549 |
| -238 | 3.9 | TAACGTTAGTTACCACACAAAA | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -267
Score: 4.64751 Sequence: TTATTTGACCTGGATCACGCTT
Locus tag: Ssed_3201
Name: SO1603 Funciton: putative transcriptional regulator, inferred for PFA pathway
Locus tag: Ssed_3202
Name: SO1602 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Ssed_3203
Name: Sputcn32_1325 Funciton: omega-3 polyunsaturated fatty acid synthase PfaB
Locus tag: Ssed_3204
Name: SO1599 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
Locus tag: Ssed_3205
Name: SO1597 Funciton: enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), inferred for PFA pathway |
||||
| SO1603-SO1602-Sputcn32_1325-SO1599-SO1597 | -267 | 4.6 | TTATTTGACCTGGATCACGCTT | Ssed_3201 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -228
Score: 4.00694 Sequence: AAATGAAACATCTATCACACAT
Locus tag: Swoo_1424
Name: SO1603 Funciton: putative transcriptional regulator, inferred for PFA pathway
Locus tag: Swoo_1423
Name: SO1602 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Swoo_1422
Name: Sputcn32_1325 Funciton: omega-3 polyunsaturated fatty acid synthase PfaB
Locus tag: Swoo_1421
Name: SO1599 Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC |
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| SO1603-SO1602-Sputcn32_1325-SO1599 | -228 | 4 | AAATGAAACATCTATCACACAT | Swoo_1424 |