Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO1247 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -108
Score: 3.79832
Sequence: TCATGTGAGCCAGGTTAAAAAA
Locus tag: Sama_0996
Name: SO1247
Funciton: hypothetical protein
SO1247 -108 3.8 TCATGTGAGCCAGGTTAAAAAA Sama_0996
Shewanella baltica OS155
Position: -159
Score: 3.83994
Sequence: AATAGTGATCTTTCTCAGCATC
Locus tag: Sbal_3204
Name: SO1247
Funciton: hypothetical protein
SO1247 -159 3.8 AATAGTGATCTTTCTCAGCATC Sbal_3204
Shewanella pealeana ATCC 700345
Position: -187
Score: 4.05502
Sequence: TTTAGTGATGTTTTTTAGATTA
Locus tag: Spea_3022
Name: SO1247
Funciton: hypothetical protein
SO1247 -187 4.1 TTTAGTGATGTTTTTTAGATTA Spea_3022
Shewanella sp MR-4
Position: -273
Score: 4.28857
Sequence: CAATGTGAGCTAGTTAACATCA
Locus tag: Shewmr4_1059
Name: SO1247
Funciton: hypothetical protein
SO1247 -273 4.3 CAATGTGAGCTAGTTAACATCA Shewmr4_1059
Shewanella sp MR-7
Position: -273
Score: 4.28857
Sequence: CAATGTGAGCTAGTTAACATCA
Locus tag: Shewmr7_1131
Name: SO1247
Funciton: hypothetical protein
SO1247 -273 4.3 CAATGTGAGCTAGTTAACATCA Shewmr7_1131
Shewanella woodyi ATCC 51908
Position: -312
Score: 4.78872
Sequence: TTTTGTGAATTGTATCACTTAT
Locus tag: Swoo_3518
Name: SO1247
Funciton: hypothetical protein
SO1247 -312 4.8 TTTTGTGAATTGTATCACTTAT Swoo_3518
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