Orthologous regulated operons containing napD gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella baltica OS155 | ||||
|
Position: -150
Score: 3.98279 Sequence: AACTTTGATCCGGATCGACTAT
Locus tag: Sbal_3510
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Sbal_3511
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sbal_3512
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napB | -150 | 4 | AACTTTGATCCGGATCGACTAT | Sbal_3510 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -174
Score: 4.1821 Sequence: ATCTGTGAATCAGATCACCATG
Locus tag: Shal_0716
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Shal_0715
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Shal_0714
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Shal_0713
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Shal_0712
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -174 | 4.2 | ATCTGTGAATCAGATCACCATG | Shal_0716 |
| Shewanella loihica PV-4 | ||||
|
Position: -154
Score: 3.77479 Sequence: AACTTTGATCTCGATCTACAAA
Locus tag: Shew_3205
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Shew_3206
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Shew_3207
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Shew_3208
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Shew_3209
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -154 | 3.8 | AACTTTGATCTCGATCTACAAA | Shew_3205 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -260
Score: 3.931 Sequence: TAATGTGATTGGTATAAACCTC
Position: -150
Score: 3.89406 Sequence: AACTTTGATCCCGATCGACTAT
Locus tag: SO0849
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: SO0848
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: SO0847
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: SO0846
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: SO0845
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
||||
| napD-napA-napG-napH-napB | -260 | 3.9 | TAATGTGATTGGTATAAACCTC | SO0849 |
| -150 | 3.9 | AACTTTGATCCCGATCGACTAT | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -173
Score: 4.2894 Sequence: ATTTGTGAACTAGATCAACACT
Locus tag: Spea_0624
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Spea_0623
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Spea_0622
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Spea_0621
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Spea_0620
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -173 | 4.3 | ATTTGTGAACTAGATCAACACT | Spea_0624 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -147
Score: 3.89406 Sequence: AACTTTGATCCCGATCGACTAT
Locus tag: Sputcn32_3147
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Sputcn32_3148
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sputcn32_3149
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Sputcn32_3150
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Sputcn32_3151
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -147 | 3.9 | AACTTTGATCCCGATCGACTAT | Sputcn32_3147 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -187
Score: 4.11887 Sequence: ATCTGAGACATAGGTCACACAT
Locus tag: Ssed_3956
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Ssed_3957
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Ssed_3958
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Ssed_3959
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Ssed_3960
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -187 | 4.1 | ATCTGAGACATAGGTCACACAT | Ssed_3956 |
| Shewanella sp ANA-3 | ||||
|
Position: -149
Score: 3.89406 Sequence: AACTTTGATCCCGATCGACTAT
Locus tag: Shewana3_3429
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Shewana3_3430
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Shewana3_3431
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Shewana3_3432
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Shewana3_3433
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -149 | 3.9 | AACTTTGATCCCGATCGACTAT | Shewana3_3429 |
| Shewanella sp MR-4 | ||||
|
Position: -149
Score: 3.89406 Sequence: AACTTTGATCCCGATCGACTAT
Locus tag: Shewmr4_0705
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Shewmr4_0704
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Shewmr4_0703
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Shewmr4_0702
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Shewmr4_0701
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -149 | 3.9 | AACTTTGATCCCGATCGACTAT | Shewmr4_0705 |
| Shewanella sp MR-7 | ||||
|
Position: -149
Score: 3.89406 Sequence: AACTTTGATCCCGATCGACTAT
Locus tag: Shewmr7_3317
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Shewmr7_3318
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Shewmr7_3319
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Shewmr7_3320
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Shewmr7_3321
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -149 | 3.9 | AACTTTGATCCCGATCGACTAT | Shewmr7_3317 |
| Shewanella sp W3-18-1 | ||||
|
Position: -147
Score: 3.89406 Sequence: AACTTTGATCCCGATCGACTAT
Locus tag: Sputw3181_0796
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Sputw3181_0795
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sputw3181_0794
Name: napG Funciton: ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: Sputw3181_0793
Name: napH Funciton: polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: Sputw3181_0792
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napG-napH-napB | -147 | 3.9 | AACTTTGATCCCGATCGACTAT | Sputw3181_0796 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -179
Score: 4.43727 Sequence: AAATGTGAACTCCATCACGCAC
Position: -155
Score: 3.92295 Sequence: AATATTGATCTTGATCGACTAA
Locus tag: Swoo_4109
Name: napD Funciton: periplasmic nitrate reductase component NapD
Locus tag: Swoo_4110
Name: napA Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Swoo_4111
Name: napB Funciton: nitrate reductase cytochrome c550-type subunit |
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| napD-napA-napB | -179 | 4.4 | AAATGTGAACTCCATCACGCAC | Swoo_4109 |
| -155 | 3.9 | AATATTGATCTTGATCGACTAA | ||