Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO1419 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -93
Score: 4.09607
Sequence: TTGTGTTAACTGCGTCAAATAA
Locus tag: Shal_2064
Name: SO1419
Funciton: lipoprotein, putative
Locus tag: Shal_2065
Name: SO1420
Funciton: outer membrane porin, putative
SO1419-SO1420 -93 4.1 TTGTGTTAACTGCGTCAAATAA Shal_2064
Shewanella loihica PV-4
Position: -120
Score: 4.46207
Sequence: TTTTGTTAAGCAGATCAAAATA
Locus tag: Shew_1972
Name: SO1419
Funciton: lipoprotein, putative
Locus tag: Shew_1973
Name: SO1420
Funciton: outer membrane porin, putative
SO1419-SO1420 -120 4.5 TTTTGTTAAGCAGATCAAAATA Shew_1972
Shewanella oneidensis MR-1
Position: -117
Score: 3.9475
Sequence: AAGTGTTAGCTAACTCATAGAT
Locus tag: SO1419
Name: SO1419
Funciton: lipoprotein, putative
Locus tag: SO1420
Name: SO1420
Funciton: outer membrane porin, putative
SO1419-SO1420 -117 3.9 AAGTGTTAGCTAACTCATAGAT SO1419
Shewanella pealeana ATCC 700345
Position: -120
Score: 4.15776
Sequence: TAGTGTTAACTGTGTCAAATAA
Locus tag: Spea_2091
Name: SO1419
Funciton: lipoprotein, putative
Locus tag: Spea_2092
Name: SO1420
Funciton: outer membrane porin, putative
SO1419-SO1420 -120 4.2 TAGTGTTAACTGTGTCAAATAA Spea_2091
Shewanella piezotolerans WP3
Position: -119
Score: 4.47596
Sequence: AAATGTTATCTCTGTCAAACAA
Locus tag: swp_2516
Name: SO1419
Funciton: lipoprotein, putative
Locus tag: swp_2517
Name: SO1420
Funciton: outer membrane porin, putative
SO1419-SO1420 -119 4.5 AAATGTTATCTCTGTCAAACAA swp_2516
Shewanella sediminis HAW-EB3
Position: -159
Score: 4.20258
Sequence: ATGTGTTAACTGGGTCAAATAT
Locus tag: Ssed_2279
Name: SO1419
Funciton: lipoprotein, putative
Locus tag: Ssed_2278
Name: SO1420
Funciton: outer membrane porin, putative
SO1419-SO1420 -159 4.2 ATGTGTTAACTGGGTCAAATAT Ssed_2279