Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0141 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -137
Score: 4.64484
Sequence: TTTTGTGATGTGGATTAGAAAT
Locus tag: Sama_0142
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -137 4.6 TTTTGTGATGTGGATTAGAAAT Sama_0142
Shewanella baltica OS155
Position: -160
Score: 4.21191
Sequence: TTTCGTGACCTAGATTAGATAT
Locus tag: Sbal_4220
Name: SO0141
Funciton: sensory box/GGDEF family protein
Locus tag: Sbal_4221
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141-SO0141 -160 4.2 TTTCGTGACCTAGATTAGATAT Sbal_4220
Shewanella loihica PV-4
Position: -55
Score: 4.01436
Sequence: TTTCGTGACCTAGATTAGACTT
Locus tag: Shew_0041
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -55 4 TTTCGTGACCTAGATTAGACTT Shew_0041
Shewanella oneidensis MR-1
Position: -161
Score: 4.11599
Sequence: TTTCGTGAGCTAGATTAGATAT
Locus tag: SO0141
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -161 4.1 TTTCGTGAGCTAGATTAGATAT SO0141
Shewanella piezotolerans WP3
Position: -156
Score: 4.00778
Sequence: ATTCGTGACCTAGATTAGACTT
Locus tag: swp_0168
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -156 4 ATTCGTGACCTAGATTAGACTT swp_0168
Shewanella putrefaciens CN-32
Position: -174
Score: 4.21191
Sequence: TTTCGTGACCTAGATTAGATAT
Locus tag: Sputcn32_0133
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -174 4.2 TTTCGTGACCTAGATTAGATAT Sputcn32_0133
Shewanella sediminis HAW-EB3
Position: -198
Score: 3.73205
Sequence: ATCATTGATAAATATAACAAAA
Locus tag: Ssed_4373
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -198 3.7 ATCATTGATAAATATAACAAAA Ssed_4373
Shewanella sp ANA-3
Position: -163
Score: 4.11599
Sequence: TTTCGTGAGCTAGATTAGATAT
Locus tag: Shewana3_0133
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -163 4.1 TTTCGTGAGCTAGATTAGATAT Shewana3_0133
Shewanella sp MR-4
Position: -161
Score: 4.11599
Sequence: TTTCGTGAGCTAGATTAGATAT
Locus tag: Shewmr4_0134
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -161 4.1 TTTCGTGAGCTAGATTAGATAT Shewmr4_0134
Shewanella sp MR-7
Position: -161
Score: 4.11599
Sequence: TTTCGTGAGCTAGATTAGATAT
Locus tag: Shewmr7_0128
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -161 4.1 TTTCGTGAGCTAGATTAGATAT Shewmr7_0128
Shewanella sp W3-18-1
Position: -174
Score: 4.21191
Sequence: TTTCGTGACCTAGATTAGATAT
Locus tag: Sputw3181_3939
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -174 4.2 TTTCGTGACCTAGATTAGATAT Sputw3181_3939
Shewanella woodyi ATCC 51908
Position: -240
Score: 3.95395
Sequence: AATCGTGACTTAGATTAGACTT
Locus tag: Swoo_4765
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141 -240 4 AATCGTGACTTAGATTAGACTT Swoo_4765
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