Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pckA gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -145
Score: 4.13984
Sequence: TTTTCAGATCCGGCTCACACAT
Locus tag: Sama_0165
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -145 4.1 TTTTCAGATCCGGCTCACACAT Sama_0165
Shewanella halifaxensis HAW-EB4
Position: -112
Score: 4.77589
Sequence: TTTTTTGATCTTGCCCACATAT
Locus tag: Shal_4178
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -112 4.8 TTTTTTGATCTTGCCCACATAT Shal_4178
Shewanella loihica PV-4
Position: -128
Score: 4.57983
Sequence: TTTCGCGATCTTCCTCACACAT
Locus tag: Shew_3623
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -128 4.6 TTTCGCGATCTTCCTCACACAT Shew_3623
Shewanella oneidensis MR-1
Position: -150
Score: 3.81502
Sequence: CTCAATGATCCAGCTCACACTT
Locus tag: SO0162
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -150 3.8 CTCAATGATCCAGCTCACACTT SO0162
Shewanella pealeana ATCC 700345
Position: -112
Score: 4.93419
Sequence: TTTTTTGATCTAGTACACATAT
Locus tag: Spea_0140
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -112 4.9 TTTTTTGATCTAGTACACATAT Spea_0140
Shewanella piezotolerans WP3
Position: -113
Score: 4.93419
Sequence: TTTTTTGATCTAGTCCACATAT
Locus tag: swp_0182
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -113 4.9 TTTTTTGATCTAGTCCACATAT swp_0182
Shewanella putrefaciens CN-32
Position: -151
Score: 4.0269
Sequence: CACCATGATCCAGTTCACACTT
Locus tag: Sputcn32_3571
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -151 4 CACCATGATCCAGTTCACACTT Sputcn32_3571
Shewanella sediminis HAW-EB3
Position: -142
Score: 4.05822
Sequence: AAACACGATCTTCCTCACACAT
Locus tag: Ssed_4362
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -142 4.1 AAACACGATCTTCCTCACACAT Ssed_4362
Shewanella sp ANA-3
Position: -151
Score: 3.81502
Sequence: CTCAATGATCCAGCTCACACTT
Locus tag: Shewana3_0147
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -151 3.8 CTCAATGATCCAGCTCACACTT Shewana3_0147
Shewanella sp MR-4
Position: -149
Score: 3.81502
Sequence: CTCAATGATCCAGCTCACACTT
Locus tag: Shewmr4_0152
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -149 3.8 CTCAATGATCCAGCTCACACTT Shewmr4_0152
Shewanella sp MR-7
Position: -149
Score: 3.81502
Sequence: CTCAATGATCCAGCTCACACTT
Locus tag: Shewmr7_0147
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -149 3.8 CTCAATGATCCAGCTCACACTT Shewmr7_0147
Shewanella sp W3-18-1
Position: -151
Score: 4.0269
Sequence: CACCATGATCCAGTTCACACTT
Locus tag: Sputw3181_3708
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -151 4 CACCATGATCCAGTTCACACTT Sputw3181_3708
Shewanella woodyi ATCC 51908
Position: -100
Score: 3.76304
Sequence: AATCGTGACATAGCGCAAAGAC
Locus tag: Swoo_4740
Name: pckA
Funciton: phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
pckA -100 3.8 AATCGTGACATAGCGCAAAGAC Swoo_4740
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