Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3987 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -307
Score: 4.09911
Sequence: AAATTGAATATGGATCACATTT
Locus tag: Sama_0602
Name: SO3987
Funciton: hypothetical protein
SO3987 -307 4.1 AAATTGAATATGGATCACATTT Sama_0602
Shewanella baltica OS155
Position: -277
Score: 3.72399
Sequence: TAAAGCGATATATGTAACAAAC
Locus tag: Sbal_0787
Name: SO3987
Funciton: hypothetical protein
SO3987 -277 3.7 TAAAGCGATATATGTAACAAAC Sbal_0787
Shewanella halifaxensis HAW-EB4
Position: -81
Score: 4.90706
Sequence: AATAGTGATGCAGATCACACTG
Locus tag: Shal_0787
Name: SO3987
Funciton: hypothetical protein
SO3987 -81 4.9 AATAGTGATGCAGATCACACTG Shal_0787
Shewanella loihica PV-4
Position: -147
Score: 5.10165
Sequence: AGATTTGATGTAAATCACATTT
Position: -82
Score: 4.40973
Sequence: TAAAGTGACCTGTCTCACACCT
Locus tag: Shew_0778
Name: SO3987
Funciton: hypothetical protein
SO3987 -147 5.1 AGATTTGATGTAAATCACATTT Shew_0778
-82 4.4 TAAAGTGACCTGTCTCACACCT
Shewanella oneidensis MR-1
Position: -83
Score: 3.89726
Sequence: TCTTGTGAGCGAGTTCACGCCT
Locus tag: SO3987
Name: SO3987
Funciton: hypothetical protein
SO3987 -83 3.9 TCTTGTGAGCGAGTTCACGCCT SO3987
Shewanella pealeana ATCC 700345
Position: -147
Score: 4.07768
Sequence: CGATATGATTTGGATCACTTTT
Position: -82
Score: 4.21325
Sequence: AATAGTGATATACATCACAAGG
Locus tag: Spea_0734
Name: SO3987
Funciton: hypothetical protein
SO3987 -147 4.1 CGATATGATTTGGATCACTTTT Spea_0734
-82 4.2 AATAGTGATATACATCACAAGG
Shewanella piezotolerans WP3
Position: -4
Score: 4.56347
Sequence: TACTGTGATCGATATCACGTCT
Locus tag: swp_4346
Name: SO3987
Funciton: hypothetical protein
SO3987 -4 4.6 TACTGTGATCGATATCACGTCT swp_4346
Shewanella putrefaciens CN-32
Position: -83
Score: 3.96023
Sequence: TCTTGTGAGCCAGTTCACGCCT
Locus tag: Sputcn32_0679
Name: SO3987
Funciton: hypothetical protein
SO3987 -83 4 TCTTGTGAGCCAGTTCACGCCT Sputcn32_0679
Shewanella sediminis HAW-EB3
Position: -321
Score: 3.94332
Sequence: AAACTCAATATAGTTCACATTT
Position: -147
Score: 3.8978
Sequence: GGATATGATCTAAATCACACTG
Locus tag: Ssed_0816
Name: SO3987
Funciton: hypothetical protein
SO3987 -321 3.9 AAACTCAATATAGTTCACATTT Ssed_0816
-147 3.9 GGATATGATCTAAATCACACTG
Shewanella sp ANA-3
Position: -83
Score: 3.96023
Sequence: TCTTGTGAGCCAGTTCACGCCT
Locus tag: Shewana3_0651
Name: SO3987
Funciton: hypothetical protein
SO3987 -83 4 TCTTGTGAGCCAGTTCACGCCT Shewana3_0651
Shewanella sp MR-4
Position: -83
Score: 4.14529
Sequence: TCTTGTGACCTAGTTCACGCCT
Locus tag: Shewmr4_0652
Name: SO3987
Funciton: hypothetical protein
SO3987 -83 4.1 TCTTGTGACCTAGTTCACGCCT Shewmr4_0652
Shewanella sp MR-7
Position: -83
Score: 4.14529
Sequence: TCTTGTGACCTAGTTCACGCCT
Locus tag: Shewmr7_3370
Name: SO3987
Funciton: hypothetical protein
SO3987 -83 4.1 TCTTGTGACCTAGTTCACGCCT Shewmr7_3370
Shewanella sp W3-18-1
Position: -83
Score: 3.96023
Sequence: TCTTGTGAGCCAGTTCACGCCT
Locus tag: Sputw3181_3492
Name: SO3987
Funciton: hypothetical protein
SO3987 -83 4 TCTTGTGAGCCAGTTCACGCCT Sputw3181_3492
Shewanella woodyi ATCC 51908
Position: -82
Score: 4.302
Sequence: TTGTGTGACCTGCATCACGCCA
Locus tag: Swoo_3763
Name: SO3987
Funciton: hypothetical protein
SO3987 -82 4.3 TTGTGTGACCTGCATCACGCCA Swoo_3763
© 2009-2020 RegPrecise