Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0321 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -282
Score: 4.40256
Sequence: TAATTTGAAGTGAATCATAAAA
Locus tag: Sama_3332
Name: SO0318
Funciton: hypothetical protein
Locus tag: Sama_3331
Name: SO0320
Funciton: conserved domain protein
Locus tag: Sama_3330
Name: SO0321
Funciton: hypothetical protein
SO0318-SO0320-SO0321 -282 4.4 TAATTTGAAGTGAATCATAAAA Sama_3332
Shewanella pealeana ATCC 700345
Position: -146
Score: 4.68256
Sequence: ATACGTGATATTTTTCACTTTA
Locus tag: Spea_0282
Name: SO0321
Funciton: hypothetical protein
SO0321 -146 4.7 ATACGTGATATTTTTCACTTTA Spea_0282
Shewanella putrefaciens CN-32
Position: -246
Score: 3.83175
Sequence: AAAAGTGATAATGTTCTTAGAT
Position: -173
Score: 3.91797
Sequence: TATCGTGATTAGCTTGACGTAA
Position: -130
Score: 3.9893
Sequence: AAATATGATTTTATTAGCAGTT
Locus tag: Sputcn32_3677
Name: SO0318
Funciton: hypothetical protein
Locus tag: Sputcn32_3676
Name: SO0319
Funciton: conserved domain protein
Locus tag: Sputcn32_3675
Name: SO0320
Funciton: conserved domain protein
Locus tag: Sputcn32_3674
Name: SO0321
Funciton: hypothetical protein
SO0318-SO0319-SO0320-SO0321 -246 3.8 AAAAGTGATAATGTTCTTAGAT Sputcn32_3677
-173 3.9 TATCGTGATTAGCTTGACGTAA
-130 4 AAATATGATTTTATTAGCAGTT
Shewanella sp ANA-3
Position: -84
Score: 4.5619
Sequence: TTTTGTGAAACGTTTCACTATT
Position: -25
Score: 3.7966
Sequence: TAGCGTGTTTTTCATCGAATTT
Locus tag: Shewana3_3866
Name: SO0319
Funciton: conserved domain protein
Locus tag: Shewana3_3865
Name: SO0320
Funciton: conserved domain protein
Locus tag: Shewana3_3864
Name: SO0321
Funciton: hypothetical protein
SO0319-SO0320-SO0321 -84 4.6 TTTTGTGAAACGTTTCACTATT Shewana3_3866
-25 3.8 TAGCGTGTTTTTCATCGAATTT
Shewanella sp MR-4
Position: -66
Score: 4.5619
Sequence: TTTTGTGAAACGTTTCACTATT
Position: -25
Score: 3.7966
Sequence: TAGCGTGTTTTTCATCGAATTT
Locus tag: Shewmr4_3654
Name: SO0319
Funciton: conserved domain protein
Locus tag: Shewmr4_3653
Name: SO0320
Funciton: conserved domain protein
Locus tag: Shewmr4_3652
Name: SO0321
Funciton: hypothetical protein
SO0319-SO0320-SO0321 -66 4.6 TTTTGTGAAACGTTTCACTATT Shewmr4_3654
-25 3.8 TAGCGTGTTTTTCATCGAATTT
Shewanella sp MR-7
Position: -66
Score: 4.5619
Sequence: TTTTGTGAAACGTTTCACTATT
Position: -25
Score: 3.7966
Sequence: TAGCGTGTTTTTCATCGAATTT
Locus tag: Shewmr7_0290
Name: SO0319
Funciton: conserved domain protein
Locus tag: Shewmr7_0291
Name: SO0320
Funciton: conserved domain protein
Locus tag: Shewmr7_0292
Name: SO0321
Funciton: hypothetical protein
SO0319-SO0320-SO0321 -66 4.6 TTTTGTGAAACGTTTCACTATT Shewmr7_0290
-25 3.8 TAGCGTGTTTTTCATCGAATTT
Shewanella sp W3-18-1
Position: -245
Score: 3.83175
Sequence: AAAAGTGATAATGTTCTTAGAT
Position: -173
Score: 3.91797
Sequence: TATCGTGATTAGCTTGACGTAA
Position: -130
Score: 3.9893
Sequence: AAATATGATTTTATTAGCAGTT
Locus tag: Sputw3181_3818
Name: SO0318
Funciton: hypothetical protein
Locus tag: Sputw3181_3817
Name: SO0319
Funciton: conserved domain protein
Locus tag: Sputw3181_3816
Name: SO0320
Funciton: conserved domain protein
Locus tag: Sputw3181_3815
Name: SO0321
Funciton: hypothetical protein
SO0318-SO0319-SO0320-SO0321 -245 3.8 AAAAGTGATAATGTTCTTAGAT Sputw3181_3818
-173 3.9 TATCGTGATTAGCTTGACGTAA
-130 4 AAATATGATTTTATTAGCAGTT
© 2009-2020 RegPrecise