Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0318 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -282
Score: 4.40256
Sequence: TAATTTGAAGTGAATCATAAAA
Locus tag: Sama_3332
Name: SO0318
Funciton: hypothetical protein
Locus tag: Sama_3331
Name: SO0320
Funciton: conserved domain protein
Locus tag: Sama_3330
Name: SO0321
Funciton: hypothetical protein
SO0318-SO0320-SO0321 -282 4.4 TAATTTGAAGTGAATCATAAAA Sama_3332
Shewanella putrefaciens CN-32
Position: -246
Score: 3.83175
Sequence: AAAAGTGATAATGTTCTTAGAT
Position: -173
Score: 3.91797
Sequence: TATCGTGATTAGCTTGACGTAA
Position: -130
Score: 3.9893
Sequence: AAATATGATTTTATTAGCAGTT
Locus tag: Sputcn32_3677
Name: SO0318
Funciton: hypothetical protein
Locus tag: Sputcn32_3676
Name: SO0319
Funciton: conserved domain protein
Locus tag: Sputcn32_3675
Name: SO0320
Funciton: conserved domain protein
Locus tag: Sputcn32_3674
Name: SO0321
Funciton: hypothetical protein
SO0318-SO0319-SO0320-SO0321 -246 3.8 AAAAGTGATAATGTTCTTAGAT Sputcn32_3677
-173 3.9 TATCGTGATTAGCTTGACGTAA
-130 4 AAATATGATTTTATTAGCAGTT
Shewanella sp MR-7
Position: -267
Score: 4.37319
Sequence: ATGTGTGAATAGGGTCAAATAT
Locus tag: Shewmr7_0289
Name: SO0318
Funciton: hypothetical protein
SO0318 -267 4.4 ATGTGTGAATAGGGTCAAATAT Shewmr7_0289
Shewanella sp W3-18-1
Position: -245
Score: 3.83175
Sequence: AAAAGTGATAATGTTCTTAGAT
Position: -173
Score: 3.91797
Sequence: TATCGTGATTAGCTTGACGTAA
Position: -130
Score: 3.9893
Sequence: AAATATGATTTTATTAGCAGTT
Locus tag: Sputw3181_3818
Name: SO0318
Funciton: hypothetical protein
Locus tag: Sputw3181_3817
Name: SO0319
Funciton: conserved domain protein
Locus tag: Sputw3181_3816
Name: SO0320
Funciton: conserved domain protein
Locus tag: Sputw3181_3815
Name: SO0321
Funciton: hypothetical protein
SO0318-SO0319-SO0320-SO0321 -245 3.8 AAAAGTGATAATGTTCTTAGAT Sputw3181_3818
-173 3.9 TATCGTGATTAGCTTGACGTAA
-130 4 AAATATGATTTTATTAGCAGTT