Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing apbE gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -95
Score: 4.42491
Sequence: TTATTTGACGCAGTTAACACAA
Locus tag: Shal_2063
Name: apbE
Funciton: thiamin biosynthesis lipoprotein ApbE
apbE -95 4.4 TTATTTGACGCAGTTAACACAA Shal_2063
Shewanella loihica PV-4
Position: -99
Score: 4.86379
Sequence: TATTTTGATCTGCTTAACAAAA
Locus tag: Shew_1971
Name: apbE
Funciton: thiamin biosynthesis lipoprotein ApbE
apbE -99 4.9 TATTTTGATCTGCTTAACAAAA Shew_1971
Shewanella oneidensis MR-1
Position: -91
Score: 3.84627
Sequence: ATCTATGAGTTAGCTAACACTT
Locus tag: SO1418
Name: apbE
Funciton: thiamin biosynthesis lipoprotein ApbE
apbE -91 3.8 ATCTATGAGTTAGCTAACACTT SO1418
Shewanella pealeana ATCC 700345
Position: -32
Score: 4.35123
Sequence: TTATTTGACACAGTTAACACTA
Locus tag: Spea_2090
Name: apbE
Funciton: thiamin biosynthesis lipoprotein ApbE
apbE -32 4.4 TTATTTGACACAGTTAACACTA Spea_2090
Shewanella piezotolerans WP3
Position: -105
Score: 4.36506
Sequence: TTGTTTGACAGAGATAACATTT
Locus tag: swp_2515
Name: apbE
Funciton: thiamin biosynthesis lipoprotein ApbE
apbE -105 4.4 TTGTTTGACAGAGATAACATTT swp_2515
Shewanella sediminis HAW-EB3
Position: -209
Score: 4.47613
Sequence: ATATTTGACCCAGTTAACACAT
Locus tag: Ssed_2280
Name: apbE
Funciton: thiamin biosynthesis lipoprotein ApbE
apbE -209 4.5 ATATTTGACCCAGTTAACACAT Ssed_2280
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