Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO4154 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella loihica PV-4
Position: -30
Score: 3.85231
Sequence: TATTGAAATCATTTTCAAAAAA
Position: -9
Score: 3.99752
Sequence: ATTTTTGATATGTATCATCTCA
Locus tag: Shew_0506
Name: SO4154
Funciton: transcriptional regulator, LysR family
SO4154 -30 3.9 TATTGAAATCATTTTCAAAAAA Shew_0506
-9 4 ATTTTTGATATGTATCATCTCA
Shewanella oneidensis MR-1
Position: -69
Score: 3.70122
Sequence: AATTGTGCATTAGTTAATCTAT
Position: -9
Score: 4.85782
Sequence: TAATTTGATATGTATCATATAA
Locus tag: SO4154
Name: SO4154
Funciton: transcriptional regulator, LysR family
SO4154 -69 3.7 AATTGTGCATTAGTTAATCTAT SO4154
-9 4.9 TAATTTGATATGTATCATATAA
Shewanella piezotolerans WP3
Position: -9
Score: 4.36109
Sequence: ATATTTGATATGTACCACCTTA
Locus tag: swp_4588
Name: SO4154
Funciton: transcriptional regulator, LysR family
SO4154 -9 4.4 ATATTTGATATGTACCACCTTA swp_4588
Shewanella sediminis HAW-EB3
Position: -9
Score: 4.42201
Sequence: ATATTTGATATGTATCACCTCA
Locus tag: Ssed_4064
Name: SO4154
Funciton: transcriptional regulator, LysR family
SO4154 -9 4.4 ATATTTGATATGTATCACCTCA Ssed_4064
Shewanella sp ANA-3
Position: -9
Score: 4.32738
Sequence: TAATTTGATATGTACCATATAA
Locus tag: Shewana3_3695
Name: SO4154
Funciton: transcriptional regulator, LysR family
SO4154 -9 4.3 TAATTTGATATGTACCATATAA Shewana3_3695
Shewanella woodyi ATCC 51908
Position: -9
Score: 4.18779
Sequence: ATTTTTGACATGTATCACCTCA
Locus tag: Swoo_0591
Name: SO4154
Funciton: transcriptional regulator, LysR family
SO4154 -9 4.2 ATTTTTGACATGTATCACCTCA Swoo_0591
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