Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Shew_1222 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -216
Score: 4.46502
Sequence: TTAAGTGATTTGTATCGCCATA
Position: -119
Score: 4.84148
Sequence: AATAGTGAGGTGGGTCACAAAT
Locus tag: Shal_3336
Name: Shew_1222
Funciton: hypothetical protein
Shew_1222 -216 4.5 TTAAGTGATTTGTATCGCCATA Shal_3336
-119 4.8 AATAGTGAGGTGGGTCACAAAT
Shewanella loihica PV-4
Position: -66
Score: 5.00586
Sequence: TAGTGTGATGCAGCTCTCAATA
Locus tag: Shew_1222
Name: Shew_1222
Funciton: hypothetical protein
Shew_1222 -66 5 TAGTGTGATGCAGCTCTCAATA Shew_1222
Shewanella pealeana ATCC 700345
Position: -217
Score: 3.68876
Sequence: TTCAGTGATTTATATCGCCACT
Position: -121
Score: 4.42791
Sequence: AAAGGTGAGCTCGATCACAAAC
Locus tag: Spea_3260
Name: Shew_1222
Funciton: hypothetical protein
Shew_1222 -217 3.7 TTCAGTGATTTATATCGCCACT Spea_3260
-121 4.4 AAAGGTGAGCTCGATCACAAAC
Shewanella piezotolerans WP3
Position: -105
Score: 4.53382
Sequence: AAAGGTGAACTAGATCACAAAG
Locus tag: swp_1085
Name: Shew_1222
Funciton: hypothetical protein
Shew_1222 -105 4.5 AAAGGTGAACTAGATCACAAAG swp_1085
Shewanella sediminis HAW-EB3
Position: -145
Score: 5.13681
Sequence: AAAGGTGATCGATATCACATAT
Locus tag: Ssed_1323
Name: Shew_1222
Funciton: hypothetical protein
Shew_1222 -145 5.1 AAAGGTGATCGATATCACATAT Ssed_1323
Shewanella woodyi ATCC 51908
Position: -69
Score: 3.96244
Sequence: GAAGGTGATTAATATCACGTTA
Locus tag: Swoo_3332
Name: Shew_1222
Funciton: hypothetical protein
Shew_1222 -69 4 GAAGGTGATTAATATCACGTTA Swoo_3332
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