Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO4502 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -186
Score: 3.94607
Sequence: AAGTTTGAAGTGGATCATCAAA
Locus tag: Sama_3619
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Sama_3620
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -186 3.9 AAGTTTGAAGTGGATCATCAAA Sama_3619
Shewanella baltica OS155
Position: -187
Score: 4.02029
Sequence: TAGTTTGAACTAGATCATCAAA
Locus tag: Sbal_4130
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Sbal_4129
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -187 4 TAGTTTGAACTAGATCATCAAA Sbal_4130
Shewanella halifaxensis HAW-EB4
Position: -181
Score: 4.2287
Sequence: TAGTTTGAACTAGATCAACTAT
Position: -85
Score: 4.51497
Sequence: AAATGTGATCTACTACTAATTT
Locus tag: Shal_0099
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Shal_0098
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -181 4.2 TAGTTTGAACTAGATCAACTAT Shal_0099
-85 4.5 AAATGTGATCTACTACTAATTT
Shewanella loihica PV-4
Position: -190
Score: 3.98198
Sequence: TAGTTTGAACTGGATCATCAAA
Locus tag: Shew_0053
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Shew_0052
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -190 4 TAGTTTGAACTGGATCATCAAA Shew_0053
Shewanella pealeana ATCC 700345
Position: -183
Score: 4.2287
Sequence: TAGTTTGAACTAGATCAACTAT
Position: -87
Score: 3.91453
Sequence: AAGTGTGATCGACCACTAACTT
Position: -20
Score: 3.92186
Sequence: TTGCGTGACAAGGATAAAAAAT
Locus tag: Spea_4143
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Spea_4144
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -183 4.2 TAGTTTGAACTAGATCAACTAT Spea_4143
-87 3.9 AAGTGTGATCGACCACTAACTT
-20 3.9 TTGCGTGACAAGGATAAAAAAT
Shewanella piezotolerans WP3
Position: -86
Score: 4.23013
Sequence: AAGTGTGATCTGCAGCTAACTT
Position: -25
Score: 3.96595
Sequence: AAAGGTAATTGAAATCTCATAA
Locus tag: swp_5036
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: swp_5037
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -86 4.2 AAGTGTGATCTGCAGCTAACTT swp_5036
-25 4 AAAGGTAATTGAAATCTCATAA
Shewanella putrefaciens CN-32
Position: -187
Score: 3.98437
Sequence: AAGTTTGAAGTAGATCATCAAA
Position: -91
Score: 4.13587
Sequence: AATTGCGATAGATCACGCATTT
Locus tag: Sputcn32_0343
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Sputcn32_0344
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -187 4 AAGTTTGAAGTAGATCATCAAA Sputcn32_0343
-91 4.1 AATTGCGATAGATCACGCATTT
Shewanella sediminis HAW-EB3
Position: -153
Score: 3.94258
Sequence: TAACTTGAGCTGGATCATCAAT
Position: -59
Score: 3.79176
Sequence: TTAAATGAGAGAGATCACGCAT
Locus tag: Ssed_4427
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Ssed_4428
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -153 3.9 TAACTTGAGCTGGATCATCAAT Ssed_4427
-59 3.8 TTAAATGAGAGAGATCACGCAT
Shewanella sp ANA-3
Position: -187
Score: 3.95752
Sequence: TTGTTTGAGGTGGATCATCAAA
Position: -91
Score: 3.95291
Sequence: AATTGCGACGGATCACGCATTT
Locus tag: Shewana3_3910
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Shewana3_3909
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -187 4 TTGTTTGAGGTGGATCATCAAA Shewana3_3910
-91 4 AATTGCGACGGATCACGCATTT
Shewanella sp MR-4
Position: -187
Score: 3.95752
Sequence: TTGTTTGAGGTGGATCATCAAA
Position: -91
Score: 3.95291
Sequence: AATTGCGACGGATCACGCATTT
Locus tag: Shewmr4_3714
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Shewmr4_3713
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -187 4 TTGTTTGAGGTGGATCATCAAA Shewmr4_3714
-91 4 AATTGCGACGGATCACGCATTT
Shewanella sp MR-7
Position: -187
Score: 3.95752
Sequence: TTGTTTGAGGTGGATCATCAAA
Position: -91
Score: 3.95291
Sequence: AATTGCGACGGATCACGCATTT
Locus tag: Shewmr7_3785
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Shewmr7_3784
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -187 4 TTGTTTGAGGTGGATCATCAAA Shewmr7_3785
-91 4 AATTGCGACGGATCACGCATTT
Shewanella sp W3-18-1
Position: -131
Score: 3.98437
Sequence: AAGTTTGAAGTAGATCATCAAA
Position: -35
Score: 4.13587
Sequence: AATTGCGATAGATCACGCATTT
Locus tag: Sputw3181_3865
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Sputw3181_3864
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -131 4 AAGTTTGAAGTAGATCATCAAA Sputw3181_3865
-35 4.1 AATTGCGATAGATCACGCATTT
Shewanella woodyi ATCC 51908
Position: -163
Score: 4.25204
Sequence: TTTTTTGAGCTAGATCATCAAA
Locus tag: Swoo_4819
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Swoo_4820
Name: SO4502
Funciton: conserved domain protein
SO4503-SO4502 -163 4.3 TTTTTTGAGCTAGATCATCAAA Swoo_4819
© 2009-2020 RegPrecise