Orthologous regulated operons containing SO3406 gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -301
Score: 3.97847 Sequence: TAGCTTGATTTTTATCACTCTT
Position: -140
Score: 4.21233 Sequence: ATTTGAGAGCTATATCGCAGTT
Locus tag: Shal_1257
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: Shal_1256
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: Shal_1255
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -301 | 4 | TAGCTTGATTTTTATCACTCTT | Shal_1257 |
| -140 | 4.2 | ATTTGAGAGCTATATCGCAGTT | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -298
Score: 3.84979 Sequence: ATTTGTGCACAGCATCAACAAA
Locus tag: SO3406
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: SO3407
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: SO3408
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -298 | 3.8 | ATTTGTGCACAGCATCAACAAA | SO3406 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -248
Score: 3.82328 Sequence: TATTTTGATGTTTACCTCGCAT
Locus tag: Spea_1223
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: Spea_1222
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: Spea_1221
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -248 | 3.8 | TATTTTGATGTTTACCTCGCAT | Spea_1223 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -315
Score: 4.45237 Sequence: AATTGTGACTTACCCCTCATTA
Locus tag: Sputcn32_2727
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: Sputcn32_2728
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: Sputcn32_2729
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -315 | 4.5 | AATTGTGACTTACCCCTCATTA | Sputcn32_2727 |
| Shewanella sp ANA-3 | ||||
|
Position: -278
Score: 4.76886 Sequence: ATTTGTGACAAATTGCACATTA
Position: -205
Score: 4.10416 Sequence: ATTCGTTAGGGATCTCACAGAT
Locus tag: Shewana3_1149
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: Shewana3_1148
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: Shewana3_1147
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -278 | 4.8 | ATTTGTGACAAATTGCACATTA | Shewana3_1149 |
| -205 | 4.1 | ATTCGTTAGGGATCTCACAGAT | ||
| Shewanella sp MR-4 | ||||
|
Position: -278
Score: 4.76886 Sequence: ATTTGTGACAAATTGCACATTA
Position: -205
Score: 4.10416 Sequence: ATTCGTTAGGGATCTCACAGAT
Locus tag: Shewmr4_1148
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: Shewmr4_1147
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: Shewmr4_1146
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -278 | 4.8 | ATTTGTGACAAATTGCACATTA | Shewmr4_1148 |
| -205 | 4.1 | ATTCGTTAGGGATCTCACAGAT | ||
| Shewanella sp MR-7 | ||||
|
Position: -278
Score: 4.76886 Sequence: ATTTGTGACAAATTGCACATTA
Position: -205
Score: 4.06428 Sequence: ATTCGTTAGGGAACTCACAGAT
Locus tag: Shewmr7_1219
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: Shewmr7_1218
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: Shewmr7_1217
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -278 | 4.8 | ATTTGTGACAAATTGCACATTA | Shewmr7_1219 |
| -205 | 4.1 | ATTCGTTAGGGAACTCACAGAT | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -315
Score: 4.45237 Sequence: AATTGTGACTTACCCCTCATTA
Locus tag: Sputw3181_1285
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: Sputw3181_1284
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: Sputw3181_1283
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -315 | 4.5 | AATTGTGACTTACCCCTCATTA | Sputw3181_1285 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -141
Score: 4.13024 Sequence: ATATGAGATGCAGCTCTCATCT
Locus tag: Swoo_3307
Name: SO3406 Funciton: FIG024006: iron uptake protein
Locus tag: Swoo_3308
Name: SO3407 Funciton: FIG138928: iron-regulated membrane protein
Locus tag: Swoo_3309
Name: SO3408 Funciton: FIG016502: iron uptake protein |
||||
| SO3406-SO3407-SO3408 | -141 | 4.1 | ATATGAGATGCAGCTCTCATCT | Swoo_3307 |