Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Sden_3210 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -165
Score: 3.88916
Sequence: TAGAGTGATCCTCTGCAAAGAA
Position: -104
Score: 4.79864
Sequence: AATTATGATGCAATTCAAATAA
Locus tag: Sama_3031
Name: null
Funciton: hypothetical protein
Sama_3031 -165 3.9 TAGAGTGATCCTCTGCAAAGAA Sama_3031
-104 4.8 AATTATGATGCAATTCAAATAA
Shewanella denitrificans OS217
Position: -122
Score: 4.295
Sequence: AAGCGTGAACAGCATCACGTAA
Locus tag: Sden_3210
Name: null
Funciton: hypothetical protein
Sden_3210 -122 4.3 AAGCGTGAACAGCATCACGTAA Sden_3210
Shewanella frigidimarina NCIMB 400
Position: -160
Score: 4.2595
Sequence: ATAAGTGATCTAGTACTCACTT
Position: -99
Score: 4.17247
Sequence: AAACATGATCTGGTTCAAATCA
Locus tag: Sfri_3316
Name: null
Funciton: hypothetical protein
Sfri_3316 -160 4.3 ATAAGTGATCTAGTACTCACTT Sfri_3316
-99 4.2 AAACATGATCTGGTTCAAATCA
Shewanella halifaxensis HAW-EB4
Position: -165
Score: 3.77498
Sequence: TTACGTGATCGAGCGCTAGTTT
Position: -104
Score: 4.30718
Sequence: AAGTTTGACAGTGTTCAAATAT
Locus tag: Shal_3640
Name: null
Funciton: hypothetical protein
Shal_3640 -165 3.8 TTACGTGATCGAGCGCTAGTTT Shal_3640
-104 4.3 AAGTTTGACAGTGTTCAAATAT
Shewanella loihica PV-4
Position: -99
Score: 4.07908
Sequence: AACTATGACATTGTTCAAAAAA
Locus tag: Shew_0560
Name: null
Funciton: hypothetical protein
Shew_0560 -99 4.1 AACTATGACATTGTTCAAAAAA Shew_0560
Shewanella pealeana ATCC 700345
Position: -105
Score: 4.26365
Sequence: AAGTTTGACTGCGTTCAAATAA
Locus tag: Spea_3546
Name: null
Funciton: hypothetical protein
Spea_3546 -105 4.3 AAGTTTGACTGCGTTCAAATAA Spea_3546
Shewanella sediminis HAW-EB3
Position: -164
Score: 3.84569
Sequence: AAGTGTGATCTGACGCCGATTT
Position: -103
Score: 3.88583
Sequence: AACTTTGAACTTGTTCAAGTAT
Locus tag: Ssed_0791
Name: null
Funciton: hypothetical protein
Ssed_0791 -164 3.8 AAGTGTGATCTGACGCCGATTT Ssed_0791
-103 3.9 AACTTTGAACTTGTTCAAGTAT
Shewanella woodyi ATCC 51908
Position: -44
Score: 4.46639
Sequence: AAGTTTGAGCTTGTTCAAATAT
Locus tag: Swoo_4177
Name: null
Funciton: hypothetical protein
Swoo_4177 -44 4.5 AAGTTTGAGCTTGTTCAAATAT Swoo_4177
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