Orthologous regulated operons containing ppc gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -106
Score: 4.97713 Sequence: AAAAGTGATATAGAGCACATTA
Locus tag: Shal_4095
Name: ppc Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shal_4096
Name: yceB Funciton: uncharacterized lipoprotein YceB precursor |
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| ppc-yceB | -106 | 5 | AAAAGTGATATAGAGCACATTA | Shal_4095 |
| Shewanella loihica PV-4 | ||||
|
Position: -107
Score: 4.32804 Sequence: CAAGGTGATATAGAACACATAA
Locus tag: Shew_0200
Name: ppc Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shew_0199
Name: yceB Funciton: uncharacterized lipoprotein YceB precursor |
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| ppc-yceB | -107 | 4.3 | CAAGGTGATATAGAACACATAA | Shew_0200 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -106
Score: 4.36224 Sequence: TAAAGTGAGGTAGAGCACATTC
Locus tag: swp_2053
Name: ppc Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: swp_2052
Name: yceB Funciton: uncharacterized lipoprotein YceB precursor |
||||
| ppc-yceB | -106 | 4.4 | TAAAGTGAGGTAGAGCACATTC | swp_2053 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -111
Score: 3.94637 Sequence: CCGAGTGATGTAGAGCACATAA
Locus tag: Ssed_4278
Name: ppc Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Ssed_4279
Name: yceB Funciton: uncharacterized lipoprotein YceB precursor |
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| ppc-yceB | -111 | 3.9 | CCGAGTGATGTAGAGCACATAA | Ssed_4278 |
| Shewanella sp ANA-3 | ||||
|
Position: -233
Score: 3.69573 Sequence: AATATTGCGTTAGCTCGCATTT
Position: -189
Score: 3.71015 Sequence: TATCGCGATTAGTTGCATATAA
Locus tag: Shewana3_3906
Name: ppc Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shewana3_3907
Name: yceB Funciton: uncharacterized lipoprotein YceB precursor |
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| ppc-yceB | -233 | 3.7 | AATATTGCGTTAGCTCGCATTT | Shewana3_3906 |
| -189 | 3.7 | TATCGCGATTAGTTGCATATAA | ||
| Shewanella sp MR-4 | ||||
|
Position: -228
Score: 3.69573 Sequence: AATATTGCGTTAGCTCGCATTT
Position: -184
Score: 4.26965 Sequence: TATCGTGATTAGTTGCATATAA
Locus tag: Shewmr4_3710
Name: ppc Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shewmr4_3711
Name: yceB Funciton: uncharacterized lipoprotein YceB precursor |
||||
| ppc-yceB | -228 | 3.7 | AATATTGCGTTAGCTCGCATTT | Shewmr4_3710 |
| -184 | 4.3 | TATCGTGATTAGTTGCATATAA | ||
| Shewanella sp MR-7 | ||||
|
Position: -228
Score: 3.69573 Sequence: AATATTGCGTTAGCTCGCATTT
Position: -184
Score: 4.26965 Sequence: TATCGTGATTAGTTGCATATAA
Locus tag: Shewmr7_0235
Name: ppc Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shewmr7_0234
Name: yceB Funciton: uncharacterized lipoprotein YceB precursor |
||||
| ppc-yceB | -228 | 3.7 | AATATTGCGTTAGCTCGCATTT | Shewmr7_0235 |
| -184 | 4.3 | TATCGTGATTAGTTGCATATAA | ||
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -111
Score: 4.6535 Sequence: AGAAGTGATGTAGAACACATAA
Locus tag: Swoo_0327
Name: ppc Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Swoo_0326
Name: yceB Funciton: uncharacterized lipoprotein YceB precursor |
||||
| ppc-yceB | -111 | 4.7 | AGAAGTGATGTAGAACACATAA | Swoo_0327 |