Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ppc gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -106
Score: 4.97713
Sequence: AAAAGTGATATAGAGCACATTA
Locus tag: Shal_4095
Name: ppc
Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shal_4096
Name: yceB
Funciton: uncharacterized lipoprotein YceB precursor
ppc-yceB -106 5 AAAAGTGATATAGAGCACATTA Shal_4095
Shewanella loihica PV-4
Position: -107
Score: 4.32804
Sequence: CAAGGTGATATAGAACACATAA
Locus tag: Shew_0200
Name: ppc
Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shew_0199
Name: yceB
Funciton: uncharacterized lipoprotein YceB precursor
ppc-yceB -107 4.3 CAAGGTGATATAGAACACATAA Shew_0200
Shewanella piezotolerans WP3
Position: -106
Score: 4.36224
Sequence: TAAAGTGAGGTAGAGCACATTC
Locus tag: swp_2053
Name: ppc
Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: swp_2052
Name: yceB
Funciton: uncharacterized lipoprotein YceB precursor
ppc-yceB -106 4.4 TAAAGTGAGGTAGAGCACATTC swp_2053
Shewanella sediminis HAW-EB3
Position: -111
Score: 3.94637
Sequence: CCGAGTGATGTAGAGCACATAA
Locus tag: Ssed_4278
Name: ppc
Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Ssed_4279
Name: yceB
Funciton: uncharacterized lipoprotein YceB precursor
ppc-yceB -111 3.9 CCGAGTGATGTAGAGCACATAA Ssed_4278
Shewanella sp ANA-3
Position: -233
Score: 3.69573
Sequence: AATATTGCGTTAGCTCGCATTT
Position: -189
Score: 3.71015
Sequence: TATCGCGATTAGTTGCATATAA
Locus tag: Shewana3_3906
Name: ppc
Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shewana3_3907
Name: yceB
Funciton: uncharacterized lipoprotein YceB precursor
ppc-yceB -233 3.7 AATATTGCGTTAGCTCGCATTT Shewana3_3906
-189 3.7 TATCGCGATTAGTTGCATATAA
Shewanella sp MR-4
Position: -228
Score: 3.69573
Sequence: AATATTGCGTTAGCTCGCATTT
Position: -184
Score: 4.26965
Sequence: TATCGTGATTAGTTGCATATAA
Locus tag: Shewmr4_3710
Name: ppc
Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shewmr4_3711
Name: yceB
Funciton: uncharacterized lipoprotein YceB precursor
ppc-yceB -228 3.7 AATATTGCGTTAGCTCGCATTT Shewmr4_3710
-184 4.3 TATCGTGATTAGTTGCATATAA
Shewanella sp MR-7
Position: -228
Score: 3.69573
Sequence: AATATTGCGTTAGCTCGCATTT
Position: -184
Score: 4.26965
Sequence: TATCGTGATTAGTTGCATATAA
Locus tag: Shewmr7_0235
Name: ppc
Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Shewmr7_0234
Name: yceB
Funciton: uncharacterized lipoprotein YceB precursor
ppc-yceB -228 3.7 AATATTGCGTTAGCTCGCATTT Shewmr7_0235
-184 4.3 TATCGTGATTAGTTGCATATAA
Shewanella woodyi ATCC 51908
Position: -111
Score: 4.6535
Sequence: AGAAGTGATGTAGAACACATAA
Locus tag: Swoo_0327
Name: ppc
Funciton: phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Locus tag: Swoo_0326
Name: yceB
Funciton: uncharacterized lipoprotein YceB precursor
ppc-yceB -111 4.7 AGAAGTGATGTAGAACACATAA Swoo_0327
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