Orthologous regulated operons containing menD gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella baltica OS155 | ||||
|
Position: -173
Score: 4.02817 Sequence: CAAATTTATCTTTATCACATTT
Position: -89
Score: 4.74408 Sequence: AGTTGAGATATGTTTCACATTA
Locus tag: Sbal_0179
Name: Sbal_0179 Funciton: transcriptional regulator, LysR family
Locus tag: Sbal_0178
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Sbal_0177
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Sbal_0176
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Sbal_0175
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
||||
| Sbal_0179-menD-SO4574-menC-SO4576 | -173 | 4 | CAAATTTATCTTTATCACATTT | Sbal_0179 |
| -89 | 4.7 | AGTTGAGATATGTTTCACATTA | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -177
Score: 5.01631 Sequence: TTTTGTTATACCAATCACATAT
Locus tag: Shal_0297
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Shal_0296
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Shal_0295
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Shal_0294
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
||||
| menD-SO4574-menC-SO4576 | -177 | 5 | TTTTGTTATACCAATCACATAT | Shal_0297 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -149
Score: 3.98705 Sequence: TTTTGCTACCCTTATCACATAC
Locus tag: Spea_3971
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Spea_3972
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Spea_3973
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Spea_3974
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
||||
| menD-SO4574-menC-SO4576 | -149 | 4 | TTTTGCTACCCTTATCACATAC | Spea_3971 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -74
Score: 4.30708 Sequence: ATATTTGATTCATCTCATATAC
Locus tag: swp_4791
Name: SO4567 Funciton: transcriptional regulator, AsnC family
Locus tag: swp_4792
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: swp_4793
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: swp_4795
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: swp_4796
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
||||
| SO4567-menD-SO4574-menC-SO4576 | -74 | 4.3 | ATATTTGATTCATCTCATATAC | swp_4791 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -90
Score: 4.19063 Sequence: ACTTGGGATTAGTTTCACATTA
Locus tag: Sputcn32_0311
Name: Sbal_0179 Funciton: transcriptional regulator, LysR family
Locus tag: Sputcn32_0310
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Sputcn32_0309
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Sputcn32_0308
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Sputcn32_0307
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
||||
| Sbal_0179-menD-SO4574-menC-SO4576 | -90 | 4.2 | ACTTGGGATTAGTTTCACATTA | Sputcn32_0311 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -302
Score: 4.40098 Sequence: TAAAGTGATCTACAACTCAAAT
Locus tag: Ssed_0226
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Ssed_0225
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Ssed_0224
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Ssed_0223
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
||||
| menD-SO4574-menC-SO4576 | -302 | 4.4 | TAAAGTGATCTACAACTCAAAT | Ssed_0226 |
| Shewanella sp ANA-3 | ||||
|
Position: -287
Score: 3.8486 Sequence: AGTTAAGATACAGAGCACATTA
Position: -92
Score: 4.10349 Sequence: ACTTGAGACTGGTTTCACATTA
Locus tag: Shewana3_3964
Name: Sbal_0179 Funciton: transcriptional regulator, LysR family
Locus tag: Shewana3_3965
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Shewana3_3966
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Shewana3_3967
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Shewana3_3968
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
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| Sbal_0179-menD-SO4574-menC-SO4576 | -287 | 3.8 | AGTTAAGATACAGAGCACATTA | Shewana3_3964 |
| -92 | 4.1 | ACTTGAGACTGGTTTCACATTA | ||
| Shewanella sp MR-4 | ||||
|
Position: -287
Score: 3.74836 Sequence: AGTTAAGATACAGAACACATTA
Position: -92
Score: 4.10349 Sequence: ACTTGAGACTGGTTTCACATTA
Locus tag: Shewmr4_3766
Name: Sbal_0179 Funciton: transcriptional regulator, LysR family
Locus tag: Shewmr4_3767
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Shewmr4_3768
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Shewmr4_3769
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Shewmr4_3770
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
||||
| Sbal_0179-menD-SO4574-menC-SO4576 | -287 | 3.7 | AGTTAAGATACAGAACACATTA | Shewmr4_3766 |
| -92 | 4.1 | ACTTGAGACTGGTTTCACATTA | ||
| Shewanella sp MR-7 | ||||
|
Position: -287
Score: 3.8486 Sequence: AGTTAAGATACAGAGCACATTA
Position: -92
Score: 4.01529 Sequence: ACTTGAGACTAGTTTCACATTA
Locus tag: Shewmr7_3839
Name: Sbal_0179 Funciton: transcriptional regulator, LysR family
Locus tag: Shewmr7_3840
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Shewmr7_3841
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Shewmr7_3842
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Shewmr7_3843
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
||||
| Sbal_0179-menD-SO4574-menC-SO4576 | -287 | 3.8 | AGTTAAGATACAGAGCACATTA | Shewmr7_3839 |
| -92 | 4 | ACTTGAGACTAGTTTCACATTA | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -90
Score: 4.19063 Sequence: ACTTGGGATTAGTTTCACATTA
Locus tag: Sputw3181_3897
Name: Sbal_0179 Funciton: transcriptional regulator, LysR family
Locus tag: Sputw3181_3898
Name: menD Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Sputw3181_3899
Name: SO4574 Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Sputw3181_3900
Name: menC Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Sputw3181_3901
Name: SO4576 Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) |
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| Sbal_0179-menD-SO4574-menC-SO4576 | -90 | 4.2 | ACTTGGGATTAGTTTCACATTA | Sputw3181_3897 |