Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cdd gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -82
Score: 3.98623
Sequence: AAATGGGATTAGACTCCCATTA
Locus tag: Sama_1974
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -82 4 AAATGGGATTAGACTCCCATTA Sama_1974
Shewanella baltica OS155
Position: -157
Score: 3.848
Sequence: ATTCGTGAATAGACTCACTCTA
Position: -82
Score: 4.1802
Sequence: AAACGCGAGCTAACTCGCATTT
Locus tag: Sbal_1694
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -157 3.8 ATTCGTGAATAGACTCACTCTA Sbal_1694
-82 4.2 AAACGCGAGCTAACTCGCATTT
Shewanella frigidimarina NCIMB 400
Position: -44
Score: 3.76489
Sequence: AAATTTTATTTTTATCCAATTT
Locus tag: Sfri_1637
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -44 3.8 AAATTTTATTTTTATCCAATTT Sfri_1637
Shewanella halifaxensis HAW-EB4
Position: -81
Score: 3.92777
Sequence: AACTGAGATCTTCATCTCATTC
Locus tag: Shal_1783
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -81 3.9 AACTGAGATCTTCATCTCATTC Shal_1783
Shewanella oneidensis MR-1
Position: -82
Score: 4.12615
Sequence: AAACGCGAACTAACTCGCATTT
Locus tag: SO2791
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -82 4.1 AAACGCGAACTAACTCGCATTT SO2791
Shewanella piezotolerans WP3
Position: -82
Score: 4.08089
Sequence: AAGTGCGATCTCTGTCGCATTC
Locus tag: swp_3037
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -82 4.1 AAGTGCGATCTCTGTCGCATTC swp_3037
Shewanella putrefaciens CN-32
Position: -131
Score: 3.81577
Sequence: TATGGTGAAATCGGTCAAATAC
Position: -82
Score: 4.1802
Sequence: AAACGCGAGCTAACTCGCATTT
Locus tag: Sputcn32_1568
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -131 3.8 TATGGTGAAATCGGTCAAATAC Sputcn32_1568
-82 4.2 AAACGCGAGCTAACTCGCATTT
Shewanella sediminis HAW-EB3
Position: -82
Score: 3.8988
Sequence: AAATGGGAGCTGGATCTCATCA
Locus tag: Ssed_2618
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -82 3.9 AAATGGGAGCTGGATCTCATCA Ssed_2618
Shewanella sp ANA-3
Position: -82
Score: 4.12615
Sequence: AAACGCGAACTAACTCGCATTT
Locus tag: Shewana3_2573
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -82 4.1 AAACGCGAACTAACTCGCATTT Shewana3_2573
Shewanella sp MR-4
Position: -82
Score: 4.12615
Sequence: AAACGCGAACTAACTCGCATTT
Locus tag: Shewmr4_2411
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -82 4.1 AAACGCGAACTAACTCGCATTT Shewmr4_2411
Shewanella sp MR-7
Position: -82
Score: 4.12615
Sequence: AAACGCGAACTAACTCGCATTT
Locus tag: Shewmr7_2481
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -82 4.1 AAACGCGAACTAACTCGCATTT Shewmr7_2481
Shewanella sp W3-18-1
Position: -131
Score: 3.81577
Sequence: TATGGTGAAATCGGTCAAATAC
Position: -82
Score: 4.1802
Sequence: AAACGCGAGCTAACTCGCATTT
Locus tag: Sputw3181_2531
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -131 3.8 TATGGTGAAATCGGTCAAATAC Sputw3181_2531
-82 4.2 AAACGCGAGCTAACTCGCATTT
Shewanella woodyi ATCC 51908
Position: -82
Score: 3.88552
Sequence: AAATGGGAGAAAGATCCCATTA
Locus tag: Swoo_2048
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd -82 3.9 AAATGGGAGAAAGATCCCATTA Swoo_2048
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