Orthologous regulated operons containing pepQ gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -109
Score: 4.02086 Sequence: CTTTGTGATACACTGCACAGCA
Locus tag: Sama_0033
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sama_0034
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sama_0035
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Sama_0036
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
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| pepQ-SO0023-trkH-1-hemG | -109 | 4 | CTTTGTGATACACTGCACAGCA | Sama_0033 |
| Shewanella baltica OS155 | ||||
|
Position: -302
Score: 4.1807 Sequence: CTTTGTGATACACTGCACAGAG
Locus tag: Sbal_0022
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sbal_0023
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sbal_0024
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Sbal_0025
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
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| pepQ-SO0023-trkH-1-hemG | -302 | 4.2 | CTTTGTGATACACTGCACAGAG | Sbal_0022 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -250
Score: 4.00906 Sequence: CAGTGTGCGACTAATCACAAAA
Locus tag: Shal_0017
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Shal_0018
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Shal_0019
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Shal_0020
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
||||
| pepQ-SO0023-trkH-1-hemG | -250 | 4 | CAGTGTGCGACTAATCACAAAA | Shal_0017 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -237
Score: 4.40096 Sequence: CTTTGTGATACACTGCACAAAG
Locus tag: SO0022
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: SO0023
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: SO0024
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: SO0025
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
||||
| pepQ-SO0023-trkH-1-hemG | -237 | 4.4 | CTTTGTGATACACTGCACAAAG | SO0022 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -252
Score: 4.08273 Sequence: CAGTGTGCGACGAATCACAAAA
Locus tag: Spea_0019
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Spea_0020
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Spea_0021
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Spea_0022
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
||||
| pepQ-SO0023-trkH-1-hemG | -252 | 4.1 | CAGTGTGCGACGAATCACAAAA | Spea_0019 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -302
Score: 4.1807 Sequence: CTTTGTGATACACTGCACAGAG
Locus tag: Sputcn32_0014
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sputcn32_0015
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sputcn32_0016
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Sputcn32_0017
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
||||
| pepQ-SO0023-trkH-1-hemG | -302 | 4.2 | CTTTGTGATACACTGCACAGAG | Sputcn32_0014 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -48
Score: 3.80986 Sequence: TTTTCTGATAGATTTTACATCA
Locus tag: Ssed_0024
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Ssed_0025
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Ssed_0026
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Ssed_0027
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
||||
| pepQ-SO0023-trkH-1-hemG | -48 | 3.8 | TTTTCTGATAGATTTTACATCA | Ssed_0024 |
| Shewanella sp ANA-3 | ||||
|
Position: -255
Score: 4.40096 Sequence: CTTTGTGATACACTGCACAAAG
Locus tag: Shewana3_0025
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Shewana3_0026
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Shewana3_0027
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Shewana3_0028
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
||||
| pepQ-SO0023-trkH-1-hemG | -255 | 4.4 | CTTTGTGATACACTGCACAAAG | Shewana3_0025 |
| Shewanella sp MR-4 | ||||
|
Position: -255
Score: 4.40096 Sequence: CTTTGTGATACACTGCACAAAG
Locus tag: Shewmr4_0019
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Shewmr4_0020
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Shewmr4_0021
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Shewmr4_0022
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
||||
| pepQ-SO0023-trkH-1-hemG | -255 | 4.4 | CTTTGTGATACACTGCACAAAG | Shewmr4_0019 |
| Shewanella sp MR-7 | ||||
|
Position: -255
Score: 4.40096 Sequence: CTTTGTGATACACTGCACAAAG
Locus tag: Shewmr7_0017
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Shewmr7_0018
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Shewmr7_0019
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Shewmr7_0020
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
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| pepQ-SO0023-trkH-1-hemG | -255 | 4.4 | CTTTGTGATACACTGCACAAAG | Shewmr7_0017 |
| Shewanella sp W3-18-1 | ||||
|
Position: -302
Score: 4.1807 Sequence: CTTTGTGATACACTGCACAGAG
Locus tag: Sputw3181_0014
Name: pepQ Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sputw3181_0015
Name: SO0023 Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sputw3181_0016
Name: trkH-1 Funciton: potassium uptake protein TrkH
Locus tag: Sputw3181_0017
Name: hemG Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) |
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| pepQ-SO0023-trkH-1-hemG | -302 | 4.2 | CTTTGTGATACACTGCACAGAG | Sputw3181_0014 |