Orthologous regulated operons containing yfiA-1 gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella baltica OS155 | ||||
|
Position: -222
Score: 4.24049 Sequence: TTTTGTGATTGATTTATTATTA
Position: -144
Score: 4.29023 Sequence: CTTCTTGATGGCGGTCACATTT
Locus tag: Sbal_1239
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
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| yfiA-1 | -222 | 4.2 | TTTTGTGATTGATTTATTATTA | Sbal_1239 |
| -144 | 4.3 | CTTCTTGATGGCGGTCACATTT | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -319
Score: 3.94617 Sequence: AAGAGTGATAAAAATCAAGCTA
Position: -230
Score: 3.78315 Sequence: TATCCTGATGAATGCCACAATT
Locus tag: Shal_1258
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
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| yfiA-1 | -319 | 3.9 | AAGAGTGATAAAAATCAAGCTA | Shal_1258 |
| -230 | 3.8 | TATCCTGATGAATGCCACAATT | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -142
Score: 4.65684 Sequence: TTCTTTGATAGGTCTCACATTT
Locus tag: SO3403
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
||||
| yfiA-1 | -142 | 4.7 | TTCTTTGATAGGTCTCACATTT | SO3403 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -177
Score: 4.05538 Sequence: TGATGTGATAAAAAGCACTCAT
Locus tag: swp_3409
Name: null Funciton: hypothetical protein swp_3409
Locus tag: swp_3408
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
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| swp_3409-yfiA-1 | -177 | 4.1 | TGATGTGATAAAAAGCACTCAT | swp_3409 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -145
Score: 4.88106 Sequence: TTCTTTGATGTAACTCACATTT
Locus tag: Sputcn32_2725
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
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| yfiA-1 | -145 | 4.9 | TTCTTTGATGTAACTCACATTT | Sputcn32_2725 |
| Shewanella sp ANA-3 | ||||
|
Position: -142
Score: 4.56864 Sequence: TTCTTTGATAAGTCTCACATTT
Locus tag: Shewana3_1151
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
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| yfiA-1 | -142 | 4.6 | TTCTTTGATAAGTCTCACATTT | Shewana3_1151 |
| Shewanella sp MR-4 | ||||
|
Position: -142
Score: 4.60695 Sequence: TTCTTTGATAAATCTCACATTT
Locus tag: Shewmr4_1150
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
||||
| yfiA-1 | -142 | 4.6 | TTCTTTGATAAATCTCACATTT | Shewmr4_1150 |
| Shewanella sp MR-7 | ||||
|
Position: -142
Score: 5.00289 Sequence: TTTTTTGATAAATCTCACATTT
Locus tag: Shewmr7_1221
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
||||
| yfiA-1 | -142 | 5 | TTTTTTGATAAATCTCACATTT | Shewmr7_1221 |
| Shewanella sp W3-18-1 | ||||
|
Position: -145
Score: 4.88106 Sequence: TTCTTTGATGTAACTCACATTT
Locus tag: Sputw3181_1287
Name: yfiA-1 Funciton: ribosomal subunit interface protein |
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| yfiA-1 | -145 | 4.9 | TTCTTTGATGTAACTCACATTT | Sputw3181_1287 |