Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0543 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -240
Score: 3.88591
Sequence: CATTGTTACTCACTTCATACAT
Position: -126
Score: 3.94973
Sequence: ATTTATGACCATACTCACAGAG
Locus tag: Sama_3164
Name: SO0543
Funciton: hypothetical protein
SO0543 -240 3.9 CATTGTTACTCACTTCATACAT Sama_3164
-126 3.9 ATTTATGACCATACTCACAGAG
Shewanella baltica OS155
Position: -201
Score: 4.84616
Sequence: TGTTGTGCTCTCAATCACAAAA
Position: -88
Score: 3.91937
Sequence: AATTTTACCCTGATTCACAAAA
Locus tag: Sbal_0501
Name: SO0543
Funciton: hypothetical protein
SO0543 -201 4.8 TGTTGTGCTCTCAATCACAAAA Sbal_0501
-88 3.9 AATTTTACCCTGATTCACAAAA
Shewanella denitrificans OS217
Position: -34
Score: 3.93206
Sequence: TAATATGACTAGAGTCAAACAT
Locus tag: Sden_0657
Name: SO0543
Funciton: hypothetical protein
SO0543 -34 3.9 TAATATGACTAGAGTCAAACAT Sden_0657
Shewanella frigidimarina NCIMB 400
Position: -200
Score: 4.0127
Sequence: ATATTTGATCACAAGCACACTC
Locus tag: Sfri_3534
Name: SO0543
Funciton: hypothetical protein
SO0543 -200 4 ATATTTGATCACAAGCACACTC Sfri_3534
Shewanella halifaxensis HAW-EB4
Position: -235
Score: 4.70012
Sequence: TTTTGTTACATGGATCGCATAT
Locus tag: Shal_3818
Name: SO0543
Funciton: hypothetical protein
SO0543 -235 4.7 TTTTGTTACATGGATCGCATAT Shal_3818
Shewanella loihica PV-4
Position: -190
Score: 4.1607
Sequence: TAGTGTTAACTCGATCAAACAA
Locus tag: Shew_0428
Name: SO0543
Funciton: hypothetical protein
SO0543 -190 4.2 TAGTGTTAACTCGATCAAACAA Shew_0428
Shewanella oneidensis MR-1
Position: -192
Score: 3.7012
Sequence: CGTTATGCGCTAAATCACAAAA
Locus tag: SO0543
Name: SO0543
Funciton: hypothetical protein
SO0543 -192 3.7 CGTTATGCGCTAAATCACAAAA SO0543
Shewanella pealeana ATCC 700345
Position: -197
Score: 4.17892
Sequence: TTTTGCTACATAGATCGCATAT
Locus tag: Spea_3733
Name: SO0543
Funciton: hypothetical protein
SO0543 -197 4.2 TTTTGCTACATAGATCGCATAT Spea_3733
Shewanella piezotolerans WP3
Position: -156
Score: 4.64928
Sequence: TTTTGTTACACAGATCGCATAT
Locus tag: swp_0532
Name: SO0543
Funciton: hypothetical protein
SO0543 -156 4.6 TTTTGTTACACAGATCGCATAT swp_0532
Shewanella putrefaciens CN-32
Position: -88
Score: 4.16514
Sequence: ATTTTTACTCTAATTCACAAAA
Locus tag: Sputcn32_3331
Name: SO0543
Funciton: hypothetical protein
SO0543 -88 4.2 ATTTTTACTCTAATTCACAAAA Sputcn32_3331
Shewanella sediminis HAW-EB3
Position: -213
Score: 4.19313
Sequence: TAATGTTAAATCGATCTCACTT
Locus tag: Ssed_0598
Name: SO0543
Funciton: hypothetical protein
SO0543 -213 4.2 TAATGTTAAATCGATCTCACTT Ssed_0598
Shewanella sp ANA-3
Position: -193
Score: 4.07227
Sequence: AGTTATGCGCTAAATCACAAAA
Locus tag: Shewana3_0541
Name: SO0543
Funciton: hypothetical protein
SO0543 -193 4.1 AGTTATGCGCTAAATCACAAAA Shewana3_0541
Shewanella sp MR-4
Position: -192
Score: 3.96029
Sequence: AGTTATGCGCTTAATCACAAAA
Locus tag: Shewmr4_0542
Name: SO0543
Funciton: hypothetical protein
SO0543 -192 4 AGTTATGCGCTTAATCACAAAA Shewmr4_0542
Shewanella sp MR-7
Position: -191
Score: 3.96029
Sequence: AGTTATGCGCTTAATCACAAAA
Locus tag: Shewmr7_3488
Name: SO0543
Funciton: hypothetical protein
SO0543 -191 4 AGTTATGCGCTTAATCACAAAA Shewmr7_3488
Shewanella sp W3-18-1
Position: -88
Score: 4.16514
Sequence: ATTTTTACTCTAATTCACAAAA
Locus tag: Sputw3181_0610
Name: SO0543
Funciton: hypothetical protein
SO0543 -88 4.2 ATTTTTACTCTAATTCACAAAA Sputw3181_0610
Shewanella woodyi ATCC 51908
Position: -215
Score: 3.83055
Sequence: AATTGCTAGATAGATCTCACTT
Locus tag: Swoo_4355
Name: SO0543
Funciton: hypothetical protein
SO0543 -215 3.8 AATTGCTAGATAGATCTCACTT Swoo_4355
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