Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3719 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -130
Score: 3.89764
Sequence: AAATGTGAGGCAGTTGGAATTT
Locus tag: Sama_2882
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Sama_2881
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -130 3.9 AAATGTGAGGCAGTTGGAATTT Sama_2882
Shewanella baltica OS155
Position: -316
Score: 4.36986
Sequence: TTTTGTGAGACAGTTAAAACTA
Locus tag: Sbal_3400
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Sbal_3399
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -316 4.4 TTTTGTGAGACAGTTAAAACTA Sbal_3400
Shewanella frigidimarina NCIMB 400
Position: -144
Score: 4.02008
Sequence: TTTTGCGCGGCAGTTCACATTG
Position: -83
Score: 4.36624
Sequence: TGACGTGATCTGTTTCATGTAA
Locus tag: Sfri_0813
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Sfri_0814
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -144 4 TTTTGCGCGGCAGTTCACATTG Sfri_0813
-83 4.4 TGACGTGATCTGTTTCATGTAA
Shewanella halifaxensis HAW-EB4
Position: -139
Score: 4.01337
Sequence: TTTTGTGAGGTAGGTAAAGCTA
Position: -97
Score: 3.77917
Sequence: CCTCGTGATCTGTTTCATGTAA
Locus tag: Shal_3525
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Shal_3524
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -139 4 TTTTGTGAGGTAGGTAAAGCTA Shal_3525
-97 3.8 CCTCGTGATCTGTTTCATGTAA
Shewanella loihica PV-4
Position: -126
Score: 4.09954
Sequence: ATTTGTGACATCGGTAAACTTA
Locus tag: Shew_0678
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Shew_0679
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -126 4.1 ATTTGTGACATCGGTAAACTTA Shew_0678
Shewanella pealeana ATCC 700345
Position: -140
Score: 4.01337
Sequence: TTTTGTGAGGTAGGTAAAGCTA
Position: -98
Score: 3.77917
Sequence: CCTCGTGATCTGTTTCATGTAA
Locus tag: Spea_0673
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Spea_0674
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -140 4 TTTTGTGAGGTAGGTAAAGCTA Spea_0673
-98 3.8 CCTCGTGATCTGTTTCATGTAA
Shewanella piezotolerans WP3
Position: -124
Score: 3.90822
Sequence: TTTTGTGAGGTAGGTAAAGGTA
Position: -77
Score: 3.72591
Sequence: TGATCTGATTCAATTAAAAATA
Locus tag: swp_4046
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: swp_4045
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -124 3.9 TTTTGTGAGGTAGGTAAAGGTA swp_4046
-77 3.7 TGATCTGATTCAATTAAAAATA
Shewanella putrefaciens CN-32
Position: -207
Score: 4.47294
Sequence: TTTTGTGAGCAAGCTAAAATTA
Position: -135
Score: 3.91378
Sequence: AATTGATATTTAAATCACCTAG
Locus tag: Sputcn32_3038
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Sputcn32_3037
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -207 4.5 TTTTGTGAGCAAGCTAAAATTA Sputcn32_3038
-135 3.9 AATTGATATTTAAATCACCTAG
Shewanella sediminis HAW-EB3
Position: -120
Score: 4.85366
Sequence: ATTTGTGATGCAGGTAAAATTT
Position: -78
Score: 3.99272
Sequence: TGCCGTGATCTGTTTCATGTAA
Locus tag: Ssed_3790
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Ssed_3789
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -120 4.9 ATTTGTGATGCAGGTAAAATTT Ssed_3790
-78 4 TGCCGTGATCTGTTTCATGTAA
Shewanella sp ANA-3
Position: -317
Score: 4.12352
Sequence: TTTTGTGAGCAAGCTAGAATTA
Locus tag: Shewana3_0871
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Shewana3_0872
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -317 4.1 TTTTGTGAGCAAGCTAGAATTA Shewana3_0871
Shewanella sp MR-4
Position: -320
Score: 4.12352
Sequence: TTTTGTGAGCAAGCTAGAATTA
Locus tag: Shewmr4_3066
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Shewmr4_3065
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -320 4.1 TTTTGTGAGCAAGCTAGAATTA Shewmr4_3066
Shewanella sp MR-7
Position: -318
Score: 4.12352
Sequence: TTTTGTGAGCAAGCTAGAATTA
Locus tag: Shewmr7_0906
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Shewmr7_0907
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -318 4.1 TTTTGTGAGCAAGCTAGAATTA Shewmr7_0906
Shewanella sp W3-18-1
Position: -207
Score: 4.47294
Sequence: TTTTGTGAGCAAGCTAAAATTA
Position: -135
Score: 3.91378
Sequence: AATTGATATTTAAATCACCTAG
Locus tag: Sputw3181_0907
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Sputw3181_0908
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -207 4.5 TTTTGTGAGCAAGCTAAAATTA Sputw3181_0907
-135 3.9 AATTGATATTTAAATCACCTAG
Shewanella woodyi ATCC 51908
Position: -123
Score: 4.31185
Sequence: AATTGTGATATAGGTAAGAGTA
Locus tag: Swoo_0793
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Swoo_0794
Name: SO3719
Funciton: hypothetical protein
hemG-SO3719 -123 4.3 AATTGTGATATAGGTAAGAGTA Swoo_0793
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