Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO4139 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -95
Score: 4.50296
Sequence: TTACATGATACGCTTCACACAT
Locus tag: Sbal_3856
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Sbal_3857
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -95 4.5 TTACATGATACGCTTCACACAT Sbal_3856
Shewanella oneidensis MR-1
Position: -162
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: SO4139
Name: SO4139
Funciton: tetratricopeptide repeat family protein
SO4139 -162 4.3 TTACATGATACGCTTCACAATG SO4139
Shewanella putrefaciens CN-32
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Sputcn32_0539
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Sputcn32_0538
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Sputcn32_0539
Shewanella sp ANA-3
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Shewana3_3684
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Shewana3_3685
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Shewana3_3684
Shewanella sp MR-4
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Shewmr4_3509
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Shewmr4_3510
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Shewmr4_3509
Shewanella sp MR-7
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Shewmr7_0443
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Shewmr7_0442
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Shewmr7_0443
Shewanella sp W3-18-1
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Sputw3181_3633
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Sputw3181_3634
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Sputw3181_3633
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