Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Sputcn32_0539 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -95
Score: 4.50296
Sequence: TTACATGATACGCTTCACACAT
Locus tag: Sbal_3856
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Sbal_3857
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -95 4.5 TTACATGATACGCTTCACACAT Sbal_3856
Shewanella halifaxensis HAW-EB4
Position: -137
Score: 3.96946
Sequence: AAGCATGATCCCCTTCACGCTA
Locus tag: Shal_0532
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Sputcn32_0539 -137 4 AAGCATGATCCCCTTCACGCTA Shal_0532
Shewanella loihica PV-4
Position: -144
Score: 4.10197
Sequence: TTGCTTGATATGCTTCACGCTA
Locus tag: Shew_3394
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Sputcn32_0539 -144 4.1 TTGCTTGATATGCTTCACGCTA Shew_3394
Shewanella pealeana ATCC 700345
Position: -138
Score: 4.08475
Sequence: AAGCTTGATCCTCTTCACGCTA
Locus tag: Spea_0457
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Sputcn32_0539 -138 4.1 AAGCTTGATCCTCTTCACGCTA Spea_0457
Shewanella putrefaciens CN-32
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Sputcn32_0539
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Sputcn32_0538
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Sputcn32_0539
Shewanella sediminis HAW-EB3
Position: -154
Score: 4.16207
Sequence: ATTCATGATCCACTTCACCTAG
Locus tag: Ssed_0457
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Sputcn32_0539 -154 4.2 ATTCATGATCCACTTCACCTAG Ssed_0457
Shewanella sp ANA-3
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Shewana3_3684
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Shewana3_3685
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Shewana3_3684
Shewanella sp MR-4
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Shewmr4_3509
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Shewmr4_3510
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Shewmr4_3509
Shewanella sp MR-7
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Shewmr7_0443
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Shewmr7_0442
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Shewmr7_0443
Shewanella sp W3-18-1
Position: -94
Score: 4.27992
Sequence: TTACATGATACGCTTCACAATG
Locus tag: Sputw3181_3633
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Sputw3181_3634
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539-SO4139 -94 4.3 TTACATGATACGCTTCACAATG Sputw3181_3633
Shewanella woodyi ATCC 51908
Position: -127
Score: 3.85254
Sequence: ATTCATGATCCTCTTCACGCAG
Locus tag: Swoo_4512
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Sputcn32_0539 -127 3.9 ATTCATGATCCTCTTCACGCAG Swoo_4512
© 2009-2020 RegPrecise