Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0439 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -93
Score: 4.8117
Sequence: AAATGTGACCTAAAGCACATAC
Locus tag: Sbal_0417
Name: SO0439
Funciton: hypothetical protein
SO0439 -93 4.8 AAATGTGACCTAAAGCACATAC Sbal_0417
Shewanella frigidimarina NCIMB 400
Position: -135
Score: 5.2057
Sequence: TTTTATGATTTAGATCACAAAA
Locus tag: Sfri_0491
Name: SO0439
Funciton: hypothetical protein
SO0439 -135 5.2 TTTTATGATTTAGATCACAAAA Sfri_0491
Shewanella halifaxensis HAW-EB4
Position: -138
Score: 4.74247
Sequence: TTTTGTGACATAGGTAACACAA
Locus tag: Shal_0486
Name: SO0439
Funciton: hypothetical protein
SO0439 -138 4.7 TTTTGTGACATAGGTAACACAA Shal_0486
Shewanella oneidensis MR-1
Position: -34
Score: 4.426
Sequence: ATACGTGATCTGACGCACATCA
Locus tag: SO0439
Name: SO0439
Funciton: hypothetical protein
SO0439 -34 4.4 ATACGTGATCTGACGCACATCA SO0439
Shewanella pealeana ATCC 700345
Position: -137
Score: 4.75582
Sequence: TTTTGTGATCTAAGTAGCAAAA
Locus tag: Spea_0430
Name: SO0439
Funciton: hypothetical protein
SO0439 -137 4.8 TTTTGTGATCTAAGTAGCAAAA Spea_0430
Shewanella putrefaciens CN-32
Position: -90
Score: 4.48702
Sequence: AAATGTGAACCAGAGCACACTC
Locus tag: Sputcn32_3403
Name: SO0439
Funciton: hypothetical protein
SO0439 -90 4.5 AAATGTGAACCAGAGCACACTC Sputcn32_3403
Shewanella sediminis HAW-EB3
Position: -105
Score: 4.32443
Sequence: ATTTGTGACCAAGTTCCCAAAC
Locus tag: Ssed_3193
Name: SO0439
Funciton: hypothetical protein
SO0439 -105 4.3 ATTTGTGACCAAGTTCCCAAAC Ssed_3193
Shewanella sp ANA-3
Position: -78
Score: 4.22843
Sequence: AAGCGTGAGCTAACGCACACAA
Locus tag: Shewana3_0438
Name: SO0439
Funciton: hypothetical protein
SO0439 -78 4.2 AAGCGTGAGCTAACGCACACAA Shewana3_0438
Shewanella sp MR-4
Position: -77
Score: 3.82136
Sequence: AAGCGTGAACTTAAGCACACTC
Locus tag: Shewmr4_0442
Name: SO0439
Funciton: hypothetical protein
SO0439 -77 3.8 AAGCGTGAACTTAAGCACACTC Shewmr4_0442
Shewanella sp MR-7
Position: -77
Score: 3.82136
Sequence: AAGCGTGAACTTAAGCACACTC
Locus tag: Shewmr7_3587
Name: SO0439
Funciton: hypothetical protein
SO0439 -77 3.8 AAGCGTGAACTTAAGCACACTC Shewmr7_3587
Shewanella sp W3-18-1
Position: -90
Score: 4.48702
Sequence: AAATGTGAACCAGAGCACACTC
Locus tag: Sputw3181_0540
Name: SO0439
Funciton: hypothetical protein
SO0439 -90 4.5 AAATGTGAACCAGAGCACACTC Sputw3181_0540
Shewanella woodyi ATCC 51908
Position: -78
Score: 3.88288
Sequence: AAACAGGACGTAGATCACACTT
Locus tag: Swoo_0294
Name: SO0439
Funciton: hypothetical protein
SO0439 -78 3.9 AAACAGGACGTAGATCACACTT Swoo_0294
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