Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sel1 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -319
Score: 3.84014
Sequence: AACCATGATGCAGATCGAAATT
Locus tag: Sama_3003
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -319 3.8 AACCATGATGCAGATCGAAATT Sama_3003
Shewanella baltica OS155
Position: -278
Score: 4.35121
Sequence: TTTAGTGATTTAAGTCAACTAA
Locus tag: Sbal_0579
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -278 4.4 TTTAGTGATTTAAGTCAACTAA Sbal_0579
Shewanella frigidimarina NCIMB 400
Position: -222
Score: 4.11507
Sequence: AACTTTGATAGAGATCGTATTT
Position: -147
Score: 4.28476
Sequence: ATTTGTGATGACGGTCGACTTT
Position: -38
Score: 3.99702
Sequence: TTATTTAATCAGCTTCATAAAT
Locus tag: Sfri_3291
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -222 4.1 AACTTTGATAGAGATCGTATTT Sfri_3291
-147 4.3 ATTTGTGATGACGGTCGACTTT
-38 4 TTATTTAATCAGCTTCATAAAT
Shewanella loihica PV-4
Position: -279
Score: 3.83192
Sequence: ATTAGTAATATATGTCAACTAA
Locus tag: Shew_0586
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -279 3.8 ATTAGTAATATATGTCAACTAA Shew_0586
Shewanella oneidensis MR-1
Position: -267
Score: 4.23922
Sequence: TTTAGTGATATTAGTCAACTAA
Locus tag: SO0625
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -267 4.2 TTTAGTGATATTAGTCAACTAA SO0625
Shewanella piezotolerans WP3
Position: -153
Score: 3.82702
Sequence: TTTTTTGAACCTTATCAATAAA
Locus tag: swp_0756
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -153 3.8 TTTTTTGAACCTTATCAATAAA swp_0756
Shewanella putrefaciens CN-32
Position: -270
Score: 4.23922
Sequence: TTTAGTGATATTAGTCAACTAA
Locus tag: Sputcn32_0653
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -270 4.2 TTTAGTGATATTAGTCAACTAA Sputcn32_0653
Shewanella sediminis HAW-EB3
Position: -296
Score: 4.34462
Sequence: ATTAGTGATATAAGTCAACTAA
Locus tag: Ssed_3872
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -296 4.3 ATTAGTGATATAAGTCAACTAA Ssed_3872
Shewanella sp ANA-3
Position: -270
Score: 4.23922
Sequence: TTTAGTGATATTAGTCAACTAA
Locus tag: Shewana3_0618
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -270 4.2 TTTAGTGATATTAGTCAACTAA Shewana3_0618
Shewanella sp MR-4
Position: -270
Score: 4.23922
Sequence: TTTAGTGATATTAGTCAACTAA
Locus tag: Shewmr4_0619
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -270 4.2 TTTAGTGATATTAGTCAACTAA Shewmr4_0619
Shewanella sp MR-7
Position: -270
Score: 4.23922
Sequence: TTTAGTGATATTAGTCAACTAA
Locus tag: Shewmr7_3411
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -270 4.2 TTTAGTGATATTAGTCAACTAA Shewmr7_3411
Shewanella sp W3-18-1
Position: -270
Score: 4.23922
Sequence: TTTAGTGATATTAGTCAACTAA
Locus tag: Sputw3181_3521
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -270 4.2 TTTAGTGATATTAGTCAACTAA Sputw3181_3521
Shewanella woodyi ATCC 51908
Position: -298
Score: 4.34462
Sequence: ATTAGTGATATAAGTCAACTAA
Locus tag: Swoo_0663
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1 -298 4.3 ATTAGTGATATAAGTCAACTAA Swoo_0663
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