Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cydA gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -207
Score: 4.43706
Sequence: TAGTGTGACTCGCGTCTCAATA
Locus tag: Sbal_2979
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Sbal_2978
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -207 4.4 TAGTGTGACTCGCGTCTCAATA Sbal_2979
Shewanella denitrificans OS217
Position: -157
Score: 4.0613
Sequence: TAAATTGATCTAAATCAATTTA
Locus tag: Sden_1274
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Sden_1275
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -157 4.1 TAAATTGATCTAAATCAATTTA Sden_1274
Shewanella frigidimarina NCIMB 400
Position: -240
Score: 4.22365
Sequence: AAATCTAATGCTGGTCACATAA
Locus tag: Sfri_1142
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Sfri_1143
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -240 4.2 AAATCTAATGCTGGTCACATAA Sfri_1142
Shewanella halifaxensis HAW-EB4
Position: -234
Score: 4.13914
Sequence: ATTTGGGATGAGTATCACGGAA
Locus tag: Shal_1381
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Shal_1382
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -234 4.1 ATTTGGGATGAGTATCACGGAA Shal_1381
Shewanella loihica PV-4
Position: -206
Score: 4.73741
Sequence: TTTTGTGAGCCGCCTCTCAAAA
Locus tag: Shew_1302
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Shew_1303
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -206 4.7 TTTTGTGAGCCGCCTCTCAAAA Shew_1302
Shewanella oneidensis MR-1
Position: -203
Score: 4.15026
Sequence: TAGTGTGACTAGGGTCTCAGTA
Locus tag: SO3286
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: SO3285
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -203 4.2 TAGTGTGACTAGGGTCTCAGTA SO3286
Shewanella pealeana ATCC 700345
Position: -235
Score: 3.95186
Sequence: ATTCGGGATGGGTGTCACAAAG
Locus tag: Spea_1318
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Spea_1319
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -235 4 ATTCGGGATGGGTGTCACAAAG Spea_1318
Shewanella piezotolerans WP3
Position: -231
Score: 4.15335
Sequence: AGGTGAGACGGTGATCACAATA
Locus tag: swp_1469
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: swp_1470
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -231 4.2 AGGTGAGACGGTGATCACAATA swp_1469
Shewanella putrefaciens CN-32
Position: -204
Score: 4.27178
Sequence: TAGTGTGACGCTTGTCCCAATA
Locus tag: Sputcn32_2641
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Sputcn32_2640
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -204 4.3 TAGTGTGACGCTTGTCCCAATA Sputcn32_2641
Shewanella sediminis HAW-EB3
Position: -203
Score: 4.02682
Sequence: TAGTGTGAAGTTCGTCGTAAAA
Locus tag: Ssed_3118
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Ssed_3117
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -203 4 TAGTGTGAAGTTCGTCGTAAAA Ssed_3118
Shewanella sp ANA-3
Position: -203
Score: 4.15026
Sequence: TAGTGTGACTAGGGTCTCAGTA
Locus tag: Shewana3_1241
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Shewana3_1242
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -203 4.2 TAGTGTGACTAGGGTCTCAGTA Shewana3_1241
Shewanella sp MR-4
Position: -203
Score: 4.15026
Sequence: TAGTGTGACTAGGGTCTCAGTA
Locus tag: Shewmr4_1239
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Shewmr4_1240
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -203 4.2 TAGTGTGACTAGGGTCTCAGTA Shewmr4_1239
Shewanella sp MR-7
Position: -203
Score: 4.15026
Sequence: TAGTGTGACTAGGGTCTCAGTA
Locus tag: Shewmr7_1310
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Shewmr7_1311
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -203 4.2 TAGTGTGACTAGGGTCTCAGTA Shewmr7_1310
Shewanella sp W3-18-1
Position: -204
Score: 4.27178
Sequence: TAGTGTGACGCTTGTCCCAATA
Locus tag: Sputw3181_1366
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Sputw3181_1367
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -204 4.3 TAGTGTGACGCTTGTCCCAATA Sputw3181_1366
Shewanella woodyi ATCC 51908
Position: -204
Score: 3.76698
Sequence: TTTTGTGAGATCGGTCGGAAAG
Locus tag: Swoo_1565
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Swoo_1566
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA-cydB -204 3.8 TTTTGTGAGATCGGTCGGAAAG Swoo_1565
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