Orthologous regulated operons containing hemY gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -89
Score: 5.14021 Sequence: ATTTGCGATAGAGATCACATTT
Locus tag: Sama_3254
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sama_3255
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sama_3256
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Sama_3257
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -89 | 5.1 | ATTTGCGATAGAGATCACATTT | Sama_3254 |
| Shewanella baltica OS155 | ||||
|
Position: -132
Score: 4.91933 Sequence: AAATGTGAAGTCCGTCACACTT
Locus tag: Sbal_4000
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sbal_4001
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sbal_4002
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Sbal_4003
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -132 | 4.9 | AAATGTGAAGTCCGTCACACTT | Sbal_4000 |
| Shewanella denitrificans OS217 | ||||
|
Position: -85
Score: 3.90673 Sequence: AAATCTGCTTTGCTTCAAACAT
Locus tag: Sden_0388
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sden_0387
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sden_0386
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Sden_0385
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -85 | 3.9 | AAATCTGCTTTGCTTCAAACAT | Sden_0388 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -167
Score: 3.96383 Sequence: AATGGTGATCATCGTAGCATTT
Locus tag: Sfri_0440
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sfri_0439
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sfri_0438
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Sfri_0437
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -167 | 4 | AATGGTGATCATCGTAGCATTT | Sfri_0440 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -133
Score: 5.10167 Sequence: AAATGTGATCAACATCACGCTT
Locus tag: Shal_3917
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shal_3918
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shal_3919
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Shal_3920
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -133 | 5.1 | AAATGTGATCAACATCACGCTT | Shal_3917 |
| Shewanella loihica PV-4 | ||||
|
Position: -119
Score: 4.7007 Sequence: ATTTGAGAGCTGGATCACACTT
Locus tag: Shew_0318
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shew_0317
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shew_0316
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Shew_0315
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -119 | 4.7 | ATTTGAGAGCTGGATCACACTT | Shew_0318 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -172
Score: 3.8681 Sequence: GATTGTGCTCATGTTAACACTT
Position: -132
Score: 4.52477 Sequence: AAATGAGAGGTCCATCACACTT
Locus tag: SO4313
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: SO4314
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: SO4315
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: SO4316
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -172 | 3.9 | GATTGTGCTCATGTTAACACTT | SO4313 |
| -132 | 4.5 | AAATGAGAGGTCCATCACACTT | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -133
Score: 4.98423 Sequence: AAATGCGATCAAGATCACACTT
Locus tag: Spea_0373
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Spea_0372
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Spea_0371
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Spea_0370
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -133 | 5 | AAATGCGATCAAGATCACACTT | Spea_0373 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -40
Score: 4.29959 Sequence: AAATGTAATCCGTATCGCAACA
Locus tag: swp_0402
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: swp_0400
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: swp_0399
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: swp_0398
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -40 | 4.3 | AAATGTAATCCGTATCGCAACA | swp_0402 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -173
Score: 4.13546 Sequence: AAGTGTGCTTATGTTAACACTT
Position: -133
Score: 5.19295 Sequence: AAATGAGATCTGCATCACATTT
Locus tag: Sputcn32_3587
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sputcn32_3588
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sputcn32_3589
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Sputcn32_3590
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -173 | 4.1 | AAGTGTGCTTATGTTAACACTT | Sputcn32_3587 |
| -133 | 5.2 | AAATGAGATCTGCATCACATTT | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -133
Score: 4.87801 Sequence: AAATGAGATCAAGATCACACTT
Locus tag: Ssed_4133
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Ssed_4134
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Ssed_4135
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Ssed_4136
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -133 | 4.9 | AAATGAGATCAAGATCACACTT | Ssed_4133 |
| Shewanella sp ANA-3 | ||||
|
Position: -172
Score: 4.23847 Sequence: AAGTGTGCTCATGTTAACACTT
Position: -132
Score: 4.26867 Sequence: AAATGAGAAGTTCGTCACACTT
Locus tag: Shewana3_0386
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shewana3_0385
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shewana3_0384
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Shewana3_0383
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -172 | 4.2 | AAGTGTGCTCATGTTAACACTT | Shewana3_0386 |
| -132 | 4.3 | AAATGAGAAGTTCGTCACACTT | ||
| Shewanella sp MR-4 | ||||
|
Position: -172
Score: 4.23847 Sequence: AAGTGTGCTCATGTTAACACTT
Position: -132
Score: 4.26867 Sequence: AAATGAGAAGTTCGTCACACTT
Locus tag: Shewmr4_0388
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shewmr4_0387
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shewmr4_0386
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Shewmr4_0385
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -172 | 4.2 | AAGTGTGCTCATGTTAACACTT | Shewmr4_0388 |
| -132 | 4.3 | AAATGAGAAGTTCGTCACACTT | ||
| Shewanella sp MR-7 | ||||
|
Position: -172
Score: 4.23847 Sequence: AAGTGTGCTCATGTTAACACTT
Position: -132
Score: 4.26867 Sequence: AAATGAGAAGTTCGTCACACTT
Locus tag: Shewmr7_3638
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shewmr7_3639
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shewmr7_3640
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Shewmr7_3641
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -172 | 4.2 | AAGTGTGCTCATGTTAACACTT | Shewmr7_3638 |
| -132 | 4.3 | AAATGAGAAGTTCGTCACACTT | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -173
Score: 4.13546 Sequence: AAGTGTGCTTATGTTAACACTT
Position: -133
Score: 5.19295 Sequence: AAATGAGATCTGCATCACATTT
Locus tag: Sputw3181_3726
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sputw3181_3727
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sputw3181_3728
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Sputw3181_3729
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -173 | 4.1 | AAGTGTGCTTATGTTAACACTT | Sputw3181_3726 |
| -133 | 5.2 | AAATGAGATCTGCATCACATTT | ||
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -229
Score: 4.62137 Sequence: AAATGAGACCAAGATCACACTT
Locus tag: Swoo_0483
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Swoo_0482
Name: hemD Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Swoo_0481
Name: hemX Funciton: Homolog of E. coli HemX protein
Locus tag: Swoo_0480
Name: hemY Funciton: HemY domain-containing protein |
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| hemC-hemD-hemX-hemY | -229 | 4.6 | AAATGAGACCAAGATCACACTT | Swoo_0483 |