Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hemY gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -89
Score: 5.14021
Sequence: ATTTGCGATAGAGATCACATTT
Locus tag: Sama_3254
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sama_3255
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sama_3256
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Sama_3257
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -89 5.1 ATTTGCGATAGAGATCACATTT Sama_3254
Shewanella baltica OS155
Position: -132
Score: 4.91933
Sequence: AAATGTGAAGTCCGTCACACTT
Locus tag: Sbal_4000
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sbal_4001
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sbal_4002
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Sbal_4003
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -132 4.9 AAATGTGAAGTCCGTCACACTT Sbal_4000
Shewanella denitrificans OS217
Position: -85
Score: 3.90673
Sequence: AAATCTGCTTTGCTTCAAACAT
Locus tag: Sden_0388
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sden_0387
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sden_0386
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Sden_0385
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -85 3.9 AAATCTGCTTTGCTTCAAACAT Sden_0388
Shewanella frigidimarina NCIMB 400
Position: -167
Score: 3.96383
Sequence: AATGGTGATCATCGTAGCATTT
Locus tag: Sfri_0440
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sfri_0439
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sfri_0438
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Sfri_0437
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -167 4 AATGGTGATCATCGTAGCATTT Sfri_0440
Shewanella halifaxensis HAW-EB4
Position: -133
Score: 5.10167
Sequence: AAATGTGATCAACATCACGCTT
Locus tag: Shal_3917
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shal_3918
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shal_3919
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Shal_3920
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -133 5.1 AAATGTGATCAACATCACGCTT Shal_3917
Shewanella loihica PV-4
Position: -119
Score: 4.7007
Sequence: ATTTGAGAGCTGGATCACACTT
Locus tag: Shew_0318
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shew_0317
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shew_0316
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Shew_0315
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -119 4.7 ATTTGAGAGCTGGATCACACTT Shew_0318
Shewanella oneidensis MR-1
Position: -172
Score: 3.8681
Sequence: GATTGTGCTCATGTTAACACTT
Position: -132
Score: 4.52477
Sequence: AAATGAGAGGTCCATCACACTT
Locus tag: SO4313
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: SO4314
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: SO4315
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: SO4316
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -172 3.9 GATTGTGCTCATGTTAACACTT SO4313
-132 4.5 AAATGAGAGGTCCATCACACTT
Shewanella pealeana ATCC 700345
Position: -133
Score: 4.98423
Sequence: AAATGCGATCAAGATCACACTT
Locus tag: Spea_0373
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Spea_0372
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Spea_0371
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Spea_0370
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -133 5 AAATGCGATCAAGATCACACTT Spea_0373
Shewanella piezotolerans WP3
Position: -40
Score: 4.29959
Sequence: AAATGTAATCCGTATCGCAACA
Locus tag: swp_0402
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: swp_0400
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: swp_0399
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: swp_0398
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -40 4.3 AAATGTAATCCGTATCGCAACA swp_0402
Shewanella putrefaciens CN-32
Position: -173
Score: 4.13546
Sequence: AAGTGTGCTTATGTTAACACTT
Position: -133
Score: 5.19295
Sequence: AAATGAGATCTGCATCACATTT
Locus tag: Sputcn32_3587
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sputcn32_3588
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sputcn32_3589
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Sputcn32_3590
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -173 4.1 AAGTGTGCTTATGTTAACACTT Sputcn32_3587
-133 5.2 AAATGAGATCTGCATCACATTT
Shewanella sediminis HAW-EB3
Position: -133
Score: 4.87801
Sequence: AAATGAGATCAAGATCACACTT
Locus tag: Ssed_4133
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Ssed_4134
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Ssed_4135
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Ssed_4136
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -133 4.9 AAATGAGATCAAGATCACACTT Ssed_4133
Shewanella sp ANA-3
Position: -172
Score: 4.23847
Sequence: AAGTGTGCTCATGTTAACACTT
Position: -132
Score: 4.26867
Sequence: AAATGAGAAGTTCGTCACACTT
Locus tag: Shewana3_0386
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shewana3_0385
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shewana3_0384
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Shewana3_0383
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -172 4.2 AAGTGTGCTCATGTTAACACTT Shewana3_0386
-132 4.3 AAATGAGAAGTTCGTCACACTT
Shewanella sp MR-4
Position: -172
Score: 4.23847
Sequence: AAGTGTGCTCATGTTAACACTT
Position: -132
Score: 4.26867
Sequence: AAATGAGAAGTTCGTCACACTT
Locus tag: Shewmr4_0388
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shewmr4_0387
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shewmr4_0386
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Shewmr4_0385
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -172 4.2 AAGTGTGCTCATGTTAACACTT Shewmr4_0388
-132 4.3 AAATGAGAAGTTCGTCACACTT
Shewanella sp MR-7
Position: -172
Score: 4.23847
Sequence: AAGTGTGCTCATGTTAACACTT
Position: -132
Score: 4.26867
Sequence: AAATGAGAAGTTCGTCACACTT
Locus tag: Shewmr7_3638
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Shewmr7_3639
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Shewmr7_3640
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Shewmr7_3641
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -172 4.2 AAGTGTGCTCATGTTAACACTT Shewmr7_3638
-132 4.3 AAATGAGAAGTTCGTCACACTT
Shewanella sp W3-18-1
Position: -173
Score: 4.13546
Sequence: AAGTGTGCTTATGTTAACACTT
Position: -133
Score: 5.19295
Sequence: AAATGAGATCTGCATCACATTT
Locus tag: Sputw3181_3726
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sputw3181_3727
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sputw3181_3728
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Sputw3181_3729
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -173 4.1 AAGTGTGCTTATGTTAACACTT Sputw3181_3726
-133 5.2 AAATGAGATCTGCATCACATTT
Shewanella woodyi ATCC 51908
Position: -229
Score: 4.62137
Sequence: AAATGAGACCAAGATCACACTT
Locus tag: Swoo_0483
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Swoo_0482
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Swoo_0481
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Swoo_0480
Name: hemY
Funciton: HemY domain-containing protein
hemC-hemD-hemX-hemY -229 4.6 AAATGAGACCAAGATCACACTT Swoo_0483
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