Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO2427 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -324
Score: 3.80556
Sequence: TTAATCGATATGGGTCACAGAA
Position: -301
Score: 5.24601
Sequence: AAGTGTGATGCACGTCACAAAA
Locus tag: Sama_1838
Name: null
Funciton: TonB-dependent receptor
Sama_1838 -324 3.8 TTAATCGATATGGGTCACAGAA Sama_1838
-301 5.2 AAGTGTGATGCACGTCACAAAA
Shewanella baltica OS155
Position: -317
Score: 5.12323
Sequence: AAGCGTGATCTGTGTCACATTT
Locus tag: Sbal_2044
Name: null
Funciton: TonB-dependent receptor
Sbal_2044 -317 5.1 AAGCGTGATCTGTGTCACATTT Sbal_2044
Shewanella frigidimarina NCIMB 400
Position: -149
Score: 5.04528
Sequence: AAATGTGATGTTGTTCACATGT
Position: -4
Score: 4.14649
Sequence: ATTCATGAGTTCAGTCACATTA
Locus tag: Sfri_2416
Name: null
Funciton: TonB-dependent receptor
Sfri_2416 -149 5 AAATGTGATGTTGTTCACATGT Sfri_2416
-4 4.1 ATTCATGAGTTCAGTCACATTA
Shewanella halifaxensis HAW-EB4
Position: -306
Score: 5.46305
Sequence: AATTGTGATGCGCGTCACAATT
Position: -199
Score: 4.10655
Sequence: ACTTGTGCTGTTTGTCACAATG
Locus tag: Shal_1923
Name: null
Funciton: TonB-dependent receptor
Shal_1923 -306 5.5 AATTGTGATGCGCGTCACAATT Shal_1923
-199 4.1 ACTTGTGCTGTTTGTCACAATG
Shewanella loihica PV-4
Position: -308
Score: 5.09145
Sequence: TTTTGTGATAATGGTCACACTT
Locus tag: Shew_2074
Name: null
Funciton: TonB-dependent receptor
Shew_2074 -308 5.1 TTTTGTGATAATGGTCACACTT Shew_2074
Shewanella oneidensis MR-1
Position: -319
Score: 5.12428
Sequence: AAGTGTGATTAAAATCACACTT
Locus tag: SO2427
Name: null
Funciton: TonB-dependent receptor
SO2427 -319 5.1 AAGTGTGATTAAAATCACACTT SO2427
Shewanella piezotolerans WP3
Position: -310
Score: 4.66904
Sequence: AAGCGTGACCTGTGTCACACTT
Locus tag: swp_2362
Name: null
Funciton: TonB-dependent receptor
swp_2362 -310 4.7 AAGCGTGACCTGTGTCACACTT swp_2362
Shewanella putrefaciens CN-32
Position: -318
Score: 5.67063
Sequence: TAGTGTGATCTACATCACATAA
Position: -274
Score: 4.02843
Sequence: AAATGTTATTTTATTAACAGAG
Locus tag: Sputcn32_1940
Name: null
Funciton: TonB-dependent receptor
Sputcn32_1940 -318 5.7 TAGTGTGATCTACATCACATAA Sputcn32_1940
-274 4 AAATGTTATTTTATTAACAGAG
Shewanella sediminis HAW-EB3
Position: -316
Score: 4.61719
Sequence: TTTCGTGACGCGCGTCACAGTT
Locus tag: Ssed_2036
Name: null
Funciton: TonB-dependent receptor
Ssed_2036 -316 4.6 TTTCGTGACGCGCGTCACAGTT Ssed_2036
Shewanella sp ANA-3
Position: -320
Score: 5.24373
Sequence: AAGTGTGACACACATCACATAT
Position: -276
Score: 4.39394
Sequence: AAATGTTATTTTCTTAACAGTT
Locus tag: Shewana3_1958
Name: null
Funciton: TonB-dependent receptor
Shewana3_1958 -320 5.2 AAGTGTGACACACATCACATAT Shewana3_1958
-276 4.4 AAATGTTATTTTCTTAACAGTT
Shewanella sp MR-4
Position: -319
Score: 5.61222
Sequence: AAATGTGATGTGCGTCACATTT
Position: -275
Score: 3.89706
Sequence: AAATGTTATTTTATTAACAGCT
Locus tag: Shewmr4_1903
Name: null
Funciton: TonB-dependent receptor
Shewmr4_1903 -319 5.6 AAATGTGATGTGCGTCACATTT Shewmr4_1903
-275 3.9 AAATGTTATTTTATTAACAGCT
Shewanella sp MR-7
Position: -319
Score: 5.16364
Sequence: AAGTGTGACGTGTGTCACATTT
Position: -275
Score: 4.33811
Sequence: AAATGTTATTTTATTAACAGTA
Locus tag: Shewmr7_2075
Name: null
Funciton: TonB-dependent receptor
Shewmr7_2075 -319 5.2 AAGTGTGACGTGTGTCACATTT Shewmr7_2075
-275 4.3 AAATGTTATTTTATTAACAGTA
Shewanella sp W3-18-1
Position: -318
Score: 4.5504
Sequence: GCGTGTGATCTATATCACATAA
Locus tag: Sputw3181_2068
Name: null
Funciton: TonB-dependent receptor
Sputw3181_2068 -318 4.6 GCGTGTGATCTATATCACATAA Sputw3181_2068
Shewanella woodyi ATCC 51908
Position: -321
Score: 4.8704
Sequence: TTCTGTGACCTGTGTCACAAAA
Locus tag: Swoo_2565
Name: null
Funciton: TonB-dependent receptor
Swoo_2565 -321 4.9 TTCTGTGACCTGTGTCACAAAA Swoo_2565
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