Orthologous regulated operons containing yfiA-2 gene
| Regulog: | Crp - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -78
Score: 4.31728 Sequence: AAACGTGATTTTACTCACGACT
Locus tag: Sama_0899
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -78 | 4.3 | AAACGTGATTTTACTCACGACT | Sama_0899 |
| Shewanella baltica OS155 | ||||
|
Position: -77
Score: 5.17724 Sequence: AAATGTGATCTAGATCTCGTTT
Locus tag: Sbal_1221
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -77 | 5.2 | AAATGTGATCTAGATCTCGTTT | Sbal_1221 |
| Shewanella denitrificans OS217 | ||||
|
Position: -77
Score: 4.75052 Sequence: AAGTGTGACTTTGATCACGCTT
Position: -38
Score: 4.14028 Sequence: TAATCTGAAGTTAAGCACATAA
Locus tag: Sden_2746
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -77 | 4.8 | AAGTGTGACTTTGATCACGCTT | Sden_2746 |
| -38 | 4.1 | TAATCTGAAGTTAAGCACATAA | ||
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -77
Score: 5.02355 Sequence: AAGTGTGATGCAGATCACTATT
Locus tag: Sfri_2912
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -77 | 5 | AAGTGTGATGCAGATCACTATT | Sfri_2912 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -83
Score: 4.63076 Sequence: AAACATGACCTAGATCACACTA
Position: -58
Score: 3.78531 Sequence: TAATGTGATTGGACTATTGTAA
Locus tag: Shal_4284
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -83 | 4.6 | AAACATGACCTAGATCACACTA | Shal_4284 |
| -58 | 3.8 | TAATGTGATTGGACTATTGTAA | ||
| Shewanella loihica PV-4 | ||||
|
Position: -76
Score: 4.56203 Sequence: AAAGTTGATCTAGATCACGTTT
Locus tag: Shew_1073
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -76 | 4.6 | AAAGTTGATCTAGATCACGTTT | Shew_1073 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -78
Score: 4.65624 Sequence: AAGTGTGATTTAACTCTCGTTT
Locus tag: SO3422
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -78 | 4.7 | AAGTGTGATTTAACTCTCGTTT | SO3422 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -76
Score: 4.6428 Sequence: AAACGTGATTTAGATCACGACT
Locus tag: Spea_1060
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -76 | 4.6 | AAACGTGATTTAGATCACGACT | Spea_1060 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -76
Score: 4.6428 Sequence: AAACGTGATTTAGATCACGACT
Locus tag: swp_3757
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -76 | 4.6 | AAACGTGATTTAGATCACGACT | swp_3757 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -77
Score: 5.05406 Sequence: TTTTGTGATTTAGATCTCGTTT
Locus tag: Sputcn32_2740
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -77 | 5.1 | TTTTGTGATTTAGATCTCGTTT | Sputcn32_2740 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -222
Score: 3.83618 Sequence: TTTTGAGAGGCAAATAAAAAAA
Position: -76
Score: 4.6428 Sequence: AAACGTGATTTAGATCACGACT
Locus tag: Ssed_1169
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -222 | 3.8 | TTTTGAGAGGCAAATAAAAAAA | Ssed_1169 |
| -76 | 4.6 | AAACGTGATTTAGATCACGACT | ||
| Shewanella sp ANA-3 | ||||
|
Position: -78
Score: 5.07423 Sequence: AAATGTGATTTAGATCTCGTTT
Locus tag: Shewana3_1133
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -78 | 5.1 | AAATGTGATTTAGATCTCGTTT | Shewana3_1133 |
| Shewanella sp MR-4 | ||||
|
Position: -78
Score: 5.07423 Sequence: AAATGTGATTTAGATCTCGTTT
Locus tag: Shewmr4_1132
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -78 | 5.1 | AAATGTGATTTAGATCTCGTTT | Shewmr4_1132 |
| Shewanella sp MR-7 | ||||
|
Position: -78
Score: 5.07423 Sequence: AAATGTGATTTAGATCTCGTTT
Locus tag: Shewmr7_1203
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -78 | 5.1 | AAATGTGATTTAGATCTCGTTT | Shewmr7_1203 |
| Shewanella sp W3-18-1 | ||||
|
Position: -77
Score: 5.05406 Sequence: TTTTGTGATTTAGATCTCGTTT
Locus tag: Sputw3181_1272
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -77 | 5.1 | TTTTGTGATTTAGATCTCGTTT | Sputw3181_1272 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -76
Score: 4.50549 Sequence: AAACGTGATCAAGATCACGACT
Locus tag: Swoo_1264
Name: yfiA-2 Funciton: Ribosome hibernation protein YfiA |
||||
| yfiA-2 | -76 | 4.5 | AAACGTGATCAAGATCACGACT | Swoo_1264 |