Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing CA2559_05325 gene

Properties
Regulog: PaaR - Flavobacteria
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Bacteroidetes
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Croceibacter atlanticus HTCC2559
Position: -65
Score: 6.20578
Sequence: CTAACTAACGTTTGTTAG
Locus tag: CA2559_05340
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
Locus tag: CA2559_05335
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: CA2559_05330
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: CA2559_05325
Name: null
Funciton: hypothetical protein
Locus tag: CA2559_05320
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: CA2559_05315
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: CA2559_05310
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: CA2559_05300
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
paaE-paaA-paaB-CA2559_05325-paaC-paaD-paaG-paaH -65 6.2 CTAACTAACGTTTGTTAG CA2559_05340
Flavobacteria bacterium BBFL7
Position: -47
Score: 6.24534
Sequence: CAAACTAACAAGTGTTAG
Locus tag: BBFL7_02466
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
Locus tag: BBFL7_02465
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: BBFL7_02464
Name: null
Funciton: hypothetical protein
Locus tag: BBFL7_02463
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: BBFL7_02462
Name: null
Funciton: hypothetical protein
Locus tag: BBFL7_02461
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
paaE-paaA-BBFL7_02464-paaC-BBFL7_02462-paaD -47 6.2 CAAACTAACAAGTGTTAG BBFL7_02466