Regulons of Geobacter sp. M21

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	2	2
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	6	6
TF	Gbem_0803			2	1
TF	HcpR	Nitric oxide	Nitrosative stress response	8	6
TF	HrcA	Heat shock	Heat shock response	3	3
TF	LexA	DNA damage	SOS response	2	2
TF	LldR	L-lactate	Lactate utilization	2	4
TF	ModE	Molybdate	Molybdenum homeostasis	3	1
TF	NikR	Nickel ion, (Ni2+)	Nickel homeostasis	1	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	6	5
TF	PdxW	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	2	2
TF	PrpR	2-methylcitrate	Methylcitrate utilization	2	2
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	1	1
TF	SdhR2		Tricarboxylic acid cycle	12	9
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	1	1
RNA	MOCO_RNA_motif	Molybdenum	Molybdopterin biosynthesis; Tungsten homeostasis; Molybdenum homeostasis	6	3
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --