Regulons of Clostridium cellulolyticum H10

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	5	2
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	2	2
RNA	Glycine	Glycine	Glycine metabolism	4	2
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	L19_leader		Ribosome biogenesis	1	1
RNA	L20_leader		Ribosome biogenesis	3	1
RNA	Lysine	Lysine	Lysine biosynthesis	4	1
RNA	PreQ1	Pre-queuosine1	Queuosine biosynthesis	2	1
RNA	Purine	Adenine; Guanine	Purine metabolism	5	1
RNA	PyrR	PyrR	Pyrimidine metabolism	2	2
RNA	SAM	S-adenosylmethionine	Methionine biosynthesis	5	1
RNA	T-box(Ala)	Ala-tRNA	Amino acid metabolism	2	2
RNA	T-box(Asp)	Asp-tRNA	Amino acid metabolism	1	1
RNA	T-box(Ile)	Ile-tRNA	Amino acid metabolism	4	1
RNA	T-box(Leu)	Leu-tRNA	Amino acid metabolism	2	2
RNA	T-box(Met)	Met-tRNA	Amino acid metabolism	2	1
RNA	T-box(Phe)	Phe-tRNA	Amino acid metabolism	1	1
RNA	T-box(Ser)	Ser-tRNA	Amino acid metabolism	2	1
RNA	T-box(Thr)	Thr-tRNA	Amino acid metabolism	1	1
RNA	T-box(Trp)	Trp-tRNA	Amino acid metabolism	3	1
RNA	T-box(Tyr)	Tyr-tRNA	Amino acid metabolism	3	2
RNA	T-box(Val)	Val-tRNA	Amino acid metabolism	2	1
RNA	THF	Tetrahydrofolate	Folate metabolism	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	3
RNA	glmS	Glucosamine-6-phosphate	Amino sugar metabolism	1	1
RNA	ydaO-yuaA		Cell wall metabolism; Osmotic stress response	5	4
RNA	ykkC-yxkD		Multidrug resistance	2	1
RNA	ykoK	Magnesium ion, (Mg2+)	Magnesium homeostasis	1	1
RNA	yybP-ykoY			5	2

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --