Regulons of Haemophilus ducreyi 35000HP

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArgR	Arginine	Arginine biosynthesis	7	8
TF	FabR	Unsaturated acyl-ACP; Unsaturated acyl-CoA	Fatty acid biosynthesis	2	2
TF	FadR	Palmitoyl-CoA; Oleoyl-CoA	Fatty acid degradation	2	2
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	11	10
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	4	2
TF	LexA	DNA damage	SOS response	10	12
TF	MetJ	S-adenosylmethionine	Methionine metabolism; Methionine biosynthesis	3	2
TF	NarP	Nitrite; Nitrate	Nitrate and nitrite respiration	16	11
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	4
TF	PdxR	Pyridoxal-5-phosphate	Pyridoxine biosynthesis	1	1
TF	PurR	Hypoxanthine; Guanine	Purine metabolism	8	5
TF	SiaR	Glucosamine-6-phosphate	Sialic acid utilization	2	2
TF	TyrR	Tyrosine; Phenylalanine	Aromatic amino acid metabolism	3	2
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	Glycine	Glycine	Glycine metabolism	1	2
RNA	Lysine	Lysine	Lysine biosynthesis	2	2
RNA	MOCO_RNA_motif	Molybdenum	Molybdopterin biosynthesis; Molybdenum homeostasis	2	2
RNA	PreQ1	Pre-queuosine1	Queuosine biosynthesis	1	1
RNA	S15		Ribosome biogenesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --