Regulons of Desulfomicrobium baculatum DSM 4028

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArsR	Arsenate	Arsenic resistance	4	4
TF	ArsR2		Arsenic resistance	2	1
TF	CooA		Carbon monoxide utilization	1	1
TF	DVU0030		Amino acid transport	2	2
TF	DVU0539/DVU0946			1	2
TF	DVU0569		Amino acid metabolism	1	2
TF	DVU0621	Nitrite	Nitrate and nitrite respiration	3	1
TF	DVU1063		Motility	10	5
TF	DVU1419			1	2
TF	DVU1964/DVU1967			1	1
TF	DVU2394		Energy metabolism	3	6
TF	DVU2423		Nitrogen metabolism	4	2
TF	DVU2802			1	1
TF	DVU2827		Pyruvate metabolism	2	4
TF	DVU2894		Motility	5	2
TF	DVU2934			1	1
TF	DVU2953		Metabolite transport	1	1
TF	DVU2956			1	2
TF	DVU3023	Lactate	Lactate utilization	2	3
TF	DVU3305			2	4
TF	DVUA0057		Biofilm formation	5	4
TF	DVUA0143		Nitrogen fixation	3	3
TF	Dbac_0104		Metabolite transport	2	2
TF	Dbac_0377			1	1
TF	Dbac_1936			1	1
TF	Dbac_2821			1	3
TF	FliA		Motility	9	5
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	10	1
TF	HcpR	Nitric oxide	Nitrosative stress response	6	4
TF	HmcR		Energy metabolism	1	1
TF	HrcA	Heat shock	Heat shock response	3	1
TF	HrsM			3	4
TF	LldR	L-lactate	Lactate utilization	3	3
TF	ModE2	Molybdenum	Molybdopterin biosynthesis; Molybdenum homeostasis	13	8
TF	NifA-1		Nitrogen assimilation	7	11
TF	NikR	Nickel ion, (Ni2+)	Nickel homeostasis	2	1
TF	PerR		Peroxide stress response	6	4
TF	PhnF		Phosphonate utilization	3	3
TF	PhoB	Inorganic phosphate	Phosphate metabolism	14	22
TF	PspF	PspA regulatory protein	Phage shock response	1	1
TF	Rex	NADH	Energy metabolism	15	10
TF	RpoN		Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism	77	58
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	2	1
TF	SmtB		Heavy metal resistance	1	1
TF	TunR	Molybdate; Tungsten	Tungsten homeostasis; Molybdenum homeostasis	10	3
TF	TunR2		Molybdenum homeostasis; Metabolite transport	2	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	2	1
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	2	2
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2
RNA	yybP-ykoY			2	2

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulons of Desulfomicrobium baculatum DSM 4028

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --