Regulon of Cobalamin in Desulfomicrobium baculatum DSM 4028

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Desulfovibrionales
Under regulation:
- Genes	12
- Operons	2

Member of regulog collections

By taxonomy - Desulfovibrionales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -236 Score: 55.7 Sequence: GTCCTAATACTTAAC... Locus tag: Dbac_3396 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Locus tag: Dbac_3397 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	Dbac_3396	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	Dbac_3397	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Position: -266 Score: 92.2 Sequence: GCGTCTTTTCCACTT... Locus tag: Dbac_1710 Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Locus tag: Dbac_1711 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Dbac_1712 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: Dbac_1713 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: Dbac_1714 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Locus tag: Dbac_1715 Name: cbiA Funciton: Cobyrinic acid A,C-diamide synthase Locus tag: Dbac_1716 Name: cbiD Funciton: Cobalt-precorrin-6 synthase, anaerobic Locus tag: Dbac_1717 Name: cbiET Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Locus tag: Dbac_1718 Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG Locus tag: Dbac_1719 Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase
	Dbac_1710	cbiK	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	Dbac_1711	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Dbac_1712	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	Dbac_1713	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	Dbac_1714	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	Dbac_1715	cbiA	Cobyrinic acid A,C-diamide synthase
	Dbac_1716	cbiD	Cobalt-precorrin-6 synthase, anaerobic
	Dbac_1717	cbiET	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
	Dbac_1718	cbiG	Cobalamin biosynthesis protein CbiG
	Dbac_1719	cbiH	Cobalt-precorrin-3b C17-methyltransferase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD