Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PUR in Shewanella woodyi ATCC 51908

Properties
Regulator type: Transcription factor
TF locus tag:
Regulator family: [Other]
Regulation mode:
Biological process: Purine metabolism
Effector:
Regulog: PUR - Shewanellaceae
Statistics of regulated genes:
- Genes 8
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 60 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -160
Score: 5.6
Sequence: TATAATTTCGCCGCATTTTA
Locus tag: Swoo_3969
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Swoo_3968
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Swoo_3967
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH
Glycine cleavage system H protein
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)

Position: -57
Score: 4.5
Sequence: TATAATCCCGCCGCAATATT
Locus tag: Swoo_1559
Name: guaB
Funciton: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)
Locus tag: Swoo_1560
Name: guaA
Funciton: GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)
guaB
Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)
guaA
GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)

Position: -53
Score: 5.6
Sequence: TAGAATGGCGCCGCATAAAA
Locus tag: Swoo_2744
Name: purM
Funciton: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Locus tag: Swoo_2745
Name: purN
Funciton: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
purM
Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
purN
Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)

Position: -79
Score: 5.5
Sequence: TAAAATGCGGCGCCATAAAA
Locus tag: Swoo_3550
Name: tsx
Funciton: nucleoside-specific channel-forming protein, Tsx
tsx
nucleoside-specific channel-forming protein, Tsx
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